Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   JR311_RS06615 Genome accession   NZ_CP069391
Coordinates   1292406..1293359 (+) Length   317 a.a.
NCBI ID   WP_070081621.1    Uniprot ID   -
Organism   Bacillus velezensis strain Sam8H1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1287406..1298359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR311_RS06590 (JR311_06590) argF 1289224..1290195 (+) 972 WP_165408901.1 ornithine carbamoyltransferase -
  JR311_RS06595 (JR311_06595) - 1290271..1290450 (+) 180 WP_003155070.1 YjzC family protein -
  JR311_RS06600 (JR311_06600) - 1290487..1290672 (-) 186 WP_032874447.1 YjzD family protein -
  JR311_RS06605 (JR311_06605) - 1290933..1291667 (+) 735 WP_204530440.1 hypothetical protein -
  JR311_RS06610 (JR311_06610) - 1291750..1292316 (+) 567 WP_071391998.1 hypothetical protein -
  JR311_RS06615 (JR311_06615) med 1292406..1293359 (+) 954 WP_070081621.1 BMP family ABC transporter substrate-binding protein Regulator
  JR311_RS06620 (JR311_06620) comZ 1293372..1293563 (+) 192 WP_003155061.1 ComZ family protein Regulator
  JR311_RS06625 (JR311_06625) - 1293593..1293811 (-) 219 WP_003155059.1 hypothetical protein -
  JR311_RS06630 (JR311_06630) - 1293979..1294917 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  JR311_RS06635 (JR311_06635) fabF 1294940..1296178 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  JR311_RS06640 (JR311_06640) - 1296262..1297047 (+) 786 WP_204530441.1 DUF2268 domain-containing protein -
  JR311_RS06645 (JR311_06645) - 1297221..1298207 (+) 987 WP_029325950.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35315.92 Da        Isoelectric Point: 4.5594

>NTDB_id=534359 JR311_RS06615 WP_070081621.1 1292406..1293359(+) (med) [Bacillus velezensis strain Sam8H1]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=534359 JR311_RS06615 WP_070081621.1 1292406..1293359(+) (med) [Bacillus velezensis strain Sam8H1]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACGAGCGTTCACCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTAGGTGTCATCGCCTCCTTTCTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785