Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JR311_RS05210 Genome accession   NZ_CP069391
Coordinates   1034176..1034967 (+) Length   263 a.a.
NCBI ID   WP_165409724.1    Uniprot ID   -
Organism   Bacillus velezensis strain Sam8H1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1029176..1039967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR311_RS05185 (JR311_05185) - 1031171..1032055 (+) 885 WP_204530372.1 PhzF family phenazine biosynthesis isomerase -
  JR311_RS05190 (JR311_05190) - 1032132..1032716 (+) 585 WP_007408549.1 nitroreductase family protein -
  JR311_RS05195 (JR311_05195) - 1032755..1032946 (-) 192 WP_003155508.1 YfhD family protein -
  JR311_RS05200 (JR311_05200) - 1033017..1033127 (-) 111 WP_003155504.1 YfhE family protein -
  JR311_RS05205 (JR311_05205) - 1033185..1034084 (-) 900 WP_204530373.1 TIGR01777 family oxidoreductase -
  JR311_RS05210 (JR311_05210) recX 1034176..1034967 (+) 792 WP_165409724.1 recombination regulator RecX Regulator
  JR311_RS05215 (JR311_05215) - 1034974..1035285 (+) 312 WP_025650230.1 YfhH family protein -
  JR311_RS05220 (JR311_05220) - 1035432..1036625 (+) 1194 WP_025650229.1 MFS transporter -
  JR311_RS05225 (JR311_05225) - 1036665..1037054 (-) 390 WP_165409723.1 DUF2606 family protein -
  JR311_RS05230 (JR311_05230) - 1037017..1037928 (-) 912 WP_003155497.1 trypsin-like serine peptidase -
  JR311_RS05235 (JR311_05235) - 1038073..1038225 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  JR311_RS05240 (JR311_05240) - 1038349..1038618 (+) 270 WP_003155492.1 YfhJ family protein -
  JR311_RS05245 (JR311_05245) - 1038750..1039277 (+) 528 WP_025854031.1 SH3 domain-containing protein -
  JR311_RS05250 (JR311_05250) - 1039363..1039698 (+) 336 WP_204530374.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30964.15 Da        Isoelectric Point: 6.2735

>NTDB_id=534351 JR311_RS05210 WP_165409724.1 1034176..1034967(+) (recX) [Bacillus velezensis strain Sam8H1]
MPFITKISTQKKNTERFNVFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=534351 JR311_RS05210 WP_165409724.1 1034176..1034967(+) (recX) [Bacillus velezensis strain Sam8H1]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACGTCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTACGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGTGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATATCGGATGCGGTCTGAAAAAGAAGTC
CGGGATCACCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGGCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGCGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGAAAAATCCTCAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

78.707

100

0.787