Detailed information NTG0534236

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: JQ490_RS10835
• Genome accession: NZ_CP069378
• Coordinates: 2184074..2185102 (+)
• Length: 342 a.a.
• NCBI ID: WP_010906347.1
• Uniprot ID: A0AAP4JQE3
• Organism: Lactococcus lactis subsp. lactis bv. diacetylactis strain Ge001
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 2179074..2190102

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQ490_RS10810 (JQ490_10810)	-	2179620..2180114 (-)	495	WP_010906351.1	RNA polymerase sigma factor	-
JQ490_RS10815 (JQ490_10815)	lmrP	2180302..2181528 (+)	1227	WP_021214981.1	multidrug efflux MFS transporter LmrP	-
JQ490_RS10820 (JQ490_10820)	-	2181612..2182832 (+)	1221	WP_003132654.1	MFS transporter	-
JQ490_RS10825 (JQ490_10825)	rsmD	2183003..2183542 (+)	540	WP_015427191.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
JQ490_RS10830 (JQ490_10830)	coaD	2183590..2184087 (+)	498	WP_010906348.1	pantetheine-phosphate adenylyltransferase	-
JQ490_RS10835 (JQ490_10835)	sepM	2184074..2185102 (+)	1029	WP_010906347.1	SepM family pheromone-processing serine protease	Regulator
JQ490_RS10840 (JQ490_10840)	-	2185223..2186080 (+)	858	WP_010906346.1	transcriptional regulator	-
JQ490_RS10845 (JQ490_10845)	-	2186264..2188306 (+)	2043	WP_228764331.1	radical SAM protein	-
JQ490_RS10850 (JQ490_10850)	-	2188299..2189126 (+)	828	WP_010906344.1	radical SAM protein	-
JQ490_RS10855 (JQ490_10855)	-	2189123..2189332 (+)	210	WP_003132661.1	hypothetical protein	-
JQ490_RS10860 (JQ490_10860)	-	2189319..2189816 (+)	498	WP_021214977.1	nitroreductase family protein	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37379.98 Da
• Isoelectric Point: 9.9183

>NTDB_id=534236 JQ490_RS10835 WP_010906347.1 2184074..2185102(+) (sepM) [Lactococcus lactis subsp. lactis bv. diacetylactis strain Ge001]
MKKNKKINPKLKWGISIGLIVVALLALFYPTSYYVEMPGTTEPLGKMVKVEGKKDEHKGDFFLTTVQIARANLATMIYSH
FNSFTSIYSEQEMTGGLNDAQFNRVNQFYMETAQNTAIYQAFKLANKPYELKYEGVYVLDIAKNSTFKNKLELADTITAV
NGQQFTSSADMIAYVSKQKVGDSVTIEYTRIDGTKHKSTGKYIKIANGKTGIGISLVDHTEVVTTPKVTVNAGSIGGPSA
GMMFTLEIYSQLTGKDLRNGREIAGTGTIEHDGSIGQIGGVDKKVATASKEGAKVFLVPDSGTKKESSNNYLGAKTAAKK
LKTKMKIVPVKTIQDALDYLEK

Nucleotide

• Length: 1029 bp

>NTDB_id=534236 JQ490_RS10835 WP_010906347.1 2184074..2185102(+) (sepM) [Lactococcus lactis subsp. lactis bv. diacetylactis strain Ge001]
ATGAAAAAAAATAAAAAAATTAATCCCAAATTAAAATGGGGAATCTCGATTGGTCTAATTGTTGTTGCCCTTTTAGCTTT
ATTTTATCCAACGAGTTACTATGTGGAAATGCCCGGAACAACCGAGCCTTTAGGGAAAATGGTCAAAGTTGAAGGCAAAA
AAGATGAACATAAAGGTGATTTTTTCCTGACGACTGTCCAAATTGCACGAGCAAATCTTGCTACAATGATTTACAGCCAT
TTTAATAGTTTTACAAGCATTTACAGTGAGCAAGAAATGACTGGTGGACTTAACGACGCACAGTTCAACCGTGTCAACCA
GTTTTACATGGAAACGGCACAGAATACAGCGATTTATCAAGCTTTTAAATTAGCTAATAAACCTTATGAACTTAAATATG
AAGGCGTTTATGTCCTTGATATTGCCAAAAATTCGACCTTTAAAAATAAGCTAGAACTTGCAGATACGATTACAGCAGTC
AATGGTCAACAGTTTACATCAAGTGCCGACATGATTGCTTATGTTTCCAAACAAAAAGTCGGTGATTCAGTAACGATTGA
ATACACGAGAATTGACGGCACAAAGCACAAGTCAACTGGCAAATACATCAAAATTGCTAATGGAAAAACAGGAATTGGGA
TCAGCCTAGTTGACCATACTGAAGTCGTGACGACTCCAAAAGTTACTGTCAACGCGGGTTCAATCGGTGGTCCCTCTGCG
GGGATGATGTTTACACTAGAAATTTACAGTCAGTTGACAGGAAAAGATTTGCGAAACGGTCGCGAAATTGCTGGAACTGG
AACGATTGAACATGACGGAAGCATTGGCCAAATCGGCGGTGTTGATAAAAAAGTAGCCACAGCGAGCAAAGAAGGGGCAA
AGGTCTTCTTAGTGCCTGACTCAGGCACCAAAAAGGAAAGCAGCAACAATTACCTTGGAGCCAAAACCGCAGCTAAAAAA
CTAAAAACGAAGATGAAAATCGTTCCCGTCAAAACTATTCAGGACGCTTTAGATTATTTAGAAAAATAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (134-194)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (227-338)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	48.696	100	0.491