Detailed information NTG0534158

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LCF29_RS01270
• Genome accession: NZ_CP084096
• Coordinates: 257686..258669 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli O78 strain 3
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 252686..263669

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LCF29_RS01250 (LCF29_01250)	dppA	253829..255436 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
LCF29_RS01255 (LCF29_01255)	-	255499..255726 (-)	228	WP_032153267.1	hypothetical protein	-
LCF29_RS01260 (LCF29_01260)	dppB	255744..256763 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LCF29_RS01265 (LCF29_01265)	dppC	256773..257675 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LCF29_RS01270 (LCF29_01270)	amiE	257686..258669 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LCF29_RS01275 (LCF29_01275)	dppF	258666..259670 (+)	1005	WP_000107036.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LCF29_RS01280 (LCF29_01280)	yhjV	259700..260971 (-)	1272	WP_001313380.1	aromatic amino acid transport family protein	-
LCF29_RS01285 (LCF29_01285)	-	261447..261554 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LCF29_RS01290 (LCF29_01290)	-	261930..262037 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LCF29_RS01295 (LCF29_01295)	-	262413..262520 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=534158 LCF29_RS01270 WP_001196486.1 257686..258669(+) (amiE) [Escherichia coli O78 strain 3]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=534158 LCF29_RS01270 WP_001196486.1 257686..258669(+) (amiE) [Escherichia coli O78 strain 3]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTGAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAATCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTAGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTTGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404