Detailed information NTG0534089

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: H8R36_RS06555
• Genome accession: NZ_CP084084
• Coordinates: 1248530..1249489 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain MS2074
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1243530..1254489

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H8R36_RS06530 (H8R36_001095)	neuB	1244029..1245069 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
H8R36_RS06535	neuC	1245066..1246184 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
H8R36_RS06540 (H8R36_001096)	-	1246181..1246846 (+)	666	WP_002855897.1	acylneuraminate cytidylyltransferase family protein	-
H8R36_RS06545 (H8R36_001097)	-	1246834..1247667 (+)	834	WP_002855772.1	CatB-related O-acetyltransferase	-
H8R36_RS06550 (H8R36_001098)	waaV	1247659..1248471 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
H8R36_RS06555 (H8R36_001099)	waaF	1248530..1249489 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
H8R36_RS06560 (H8R36_001100)	gmhA	1249470..1250030 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
H8R36_RS06565 (H8R36_001101)	rfaE1	1250027..1251412 (-)	1386	WP_002856251.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
H8R36_RS06570 (H8R36_001102)	rfaD	1251405..1252358 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
H8R36_RS06575 (H8R36_001103)	gmhB	1252359..1252919 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
H8R36_RS06580 (H8R36_001104)	-	1253001..1253303 (+)	303	WP_002852762.1	cytochrome c	-
H8R36_RS06585 (H8R36_001105)	ccoS	1253326..1253532 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=534089 H8R36_RS06555 WP_002856368.1 1248530..1249489(+) (waaF) [Campylobacter jejuni strain MS2074]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=534089 H8R36_RS06555 WP_002856368.1 1248530..1249489(+) (waaF) [Campylobacter jejuni strain MS2074]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956