Detailed information NTG0533936

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LCR13_RS13165
• Genome accession: NZ_CP084055
• Coordinates: 2673051..2674034 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain X14-3
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2668051..2679034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LCR13_RS13140 (LCR13_13155)	bcsF	2668212..2668403 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
LCR13_RS13145 (LCR13_13160)	bcsG	2668400..2670079 (+)	1680	WP_073464209.1	cellulose biosynthesis protein BcsG	-
LCR13_RS13150 (LCR13_13165)	ldrD	2670166..2670273 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
LCR13_RS13155 (LCR13_13170)	yhjV	2670749..2672020 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
LCR13_RS13160 (LCR13_13175)	dppF	2672050..2673054 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LCR13_RS13165 (LCR13_13180)	amiE	2673051..2674034 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LCR13_RS13170 (LCR13_13185)	dppC	2674045..2674947 (-)	903	WP_096006704.1	dipeptide ABC transporter permease DppC	-
LCR13_RS13175 (LCR13_13190)	dppB	2674957..2675976 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LCR13_RS24320	-	2676140..2676250 (+)	111	Protein_2587	hypothetical protein	-
LCR13_RS13185 (LCR13_13195)	dppA	2676284..2677891 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=533936 LCR13_RS13165 WP_001196486.1 2673051..2674034(-) (amiE) [Escherichia coli strain X14-3]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=533936 LCR13_RS13165 WP_001196486.1 2673051..2674034(-) (amiE) [Escherichia coli strain X14-3]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404