Detailed information NTG0533875

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LC440_RS19630
• Genome accession: NZ_CP084026
• Coordinates: 4002738..4003721 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 035053C1pKPC2_Vir_090515B1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3997738..4008721

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LC440_RS19605 (LC440_19605)	bcsF	3997899..3998090 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
LC440_RS19610 (LC440_19610)	bcsG	3998087..3999766 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
LC440_RS19615 (LC440_19615)	ldrD	3999853..3999960 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
LC440_RS19620 (LC440_19620)	yhjV	4000436..4001707 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
LC440_RS19625 (LC440_19625)	dppF	4001737..4002741 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LC440_RS19630 (LC440_19630)	amiE	4002738..4003721 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LC440_RS19635 (LC440_19635)	dppC	4003732..4004634 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LC440_RS19640 (LC440_19640)	dppB	4004644..4005663 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LC440_RS19645 (LC440_19645)	dppA	4005971..4007578 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=533875 LC440_RS19630 WP_001196486.1 4002738..4003721(-) (amiE) [Escherichia coli strain 035053C1pKPC2_Vir_090515B1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=533875 LC440_RS19630 WP_001196486.1 4002738..4003721(-) (amiE) [Escherichia coli strain 035053C1pKPC2_Vir_090515B1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404