Detailed information NTG0533563

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LCE26_RS21675
• Genome accession: NZ_CP083880
• Coordinates: 4495206..4496231 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NDM3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4490206..4501231

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LCE26_RS21655 (LCE26_21655)	metJ	4491267..4491584 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LCE26_RS21660 (LCE26_21660)	yiiX	4491768..4492376 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
LCE26_RS21665 (LCE26_21665)	rpmE	4492437..4492649 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LCE26_RS21670 (LCE26_21670)	priA	4492852..4495050 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
LCE26_RS21675 (LCE26_21675)	cytR	4495206..4496231 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LCE26_RS21680 (LCE26_21680)	ftsN	4496323..4497282 (+)	960	WP_000068828.1	cell division protein FtsN	-
LCE26_RS21685 (LCE26_21685)	hslV	4497375..4497905 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LCE26_RS21690 (LCE26_21690)	hslU	4497915..4499246 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
LCE26_RS21695 (LCE26_21695)	menA	4499313..4500239 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LCE26_RS21700 (LCE26_21700)	rraA	4500332..4500817 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
LCE26_RS21705 (LCE26_21705)	zapB	4500902..4501147 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=533563 LCE26_RS21675 WP_000644904.1 4495206..4496231(+) (cytR) [Escherichia coli strain NDM3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=533563 LCE26_RS21675 WP_000644904.1 4495206..4496231(+) (cytR) [Escherichia coli strain NDM3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628