Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JQN63_RS26320 Genome accession   NZ_CP069318
Coordinates   5750091..5750489 (-) Length   132 a.a.
NCBI ID   WP_016447937.1    Uniprot ID   A0AAX3SQK3
Organism   Delftia lacustris strain R54     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5745091..5755489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQN63_RS26305 (JQN63_26310) - 5746912..5749164 (-) 2253 WP_016447934.1 methyl-accepting chemotaxis protein -
  JQN63_RS26310 (JQN63_26315) - 5749183..5749710 (-) 528 WP_016447935.1 chemotaxis protein CheW -
  JQN63_RS26315 (JQN63_26320) - 5749726..5750091 (-) 366 WP_016447936.1 response regulator -
  JQN63_RS26320 (JQN63_26325) pilG 5750091..5750489 (-) 399 WP_016447937.1 response regulator Regulator
  JQN63_RS26325 (JQN63_26330) - 5750537..5750689 (-) 153 WP_017406135.1 rubredoxin -
  JQN63_RS26330 (JQN63_26335) thiD 5750805..5751764 (+) 960 WP_070080647.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  JQN63_RS26335 (JQN63_26340) hemL 5751839..5753155 (+) 1317 WP_370690594.1 glutamate-1-semialdehyde 2,1-aminomutase -
  JQN63_RS26340 (JQN63_26345) - 5753206..5753805 (-) 600 WP_126312474.1 DNA-3-methyladenine glycosylase I -
  JQN63_RS26345 (JQN63_26350) - 5753808..5754283 (-) 476 Protein_5315 c-type cytochrome -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14600.85 Da        Isoelectric Point: 6.9242

>NTDB_id=533497 JQN63_RS26320 WP_016447937.1 5750091..5750489(-) (pilG) [Delftia lacustris strain R54]
MTTSGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
DTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQTIGAL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=533497 JQN63_RS26320 WP_016447937.1 5750091..5750489(-) (pilG) [Delftia lacustris strain R54]
GTGACGACATCGGGCGCACCCTTGCGCGTACTCGTGGTGGATGACAGCAATACCATCCGCCGCAGCGCAGAAATCTTCCT
CAAGCAGGGCGGGCACGAAGTGCTCCTGGCCGACGACGGCTTCGACGCACTGTCCAAGGTCAACGACTACCAGCCCCAGC
TGATCTTCTGCGACATCCTCATGCCCAAGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGCGCTTTGCT
GACACGCCTGTGGTCATGCTCTCGTCCAAGGACGGCGTATTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCAGGACTA
CCTCACGAAACCCTTCACCAAAGACCAGCTGCTGCAGGCCGTGGAGCAGTTCGGCAAGCAAACCATAGGAGCACTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.772

86.364

0.508