Detailed information NTG0533482

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LCE22_RS21670
• Genome accession: NZ_CP083877
• Coordinates: 4495148..4496173 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NDM4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4490148..4501173

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LCE22_RS21650 (LCE22_21650)	metJ	4491209..4491526 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LCE22_RS21655 (LCE22_21655)	yiiX	4491710..4492318 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
LCE22_RS21660 (LCE22_21660)	rpmE	4492379..4492591 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LCE22_RS21665 (LCE22_21665)	priA	4492794..4494992 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
LCE22_RS21670 (LCE22_21670)	cytR	4495148..4496173 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LCE22_RS21675 (LCE22_21675)	ftsN	4496265..4497224 (+)	960	WP_000068828.1	cell division protein FtsN	-
LCE22_RS21680 (LCE22_21680)	hslV	4497317..4497847 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LCE22_RS21685 (LCE22_21685)	hslU	4497857..4499188 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
LCE22_RS21690 (LCE22_21690)	menA	4499255..4500181 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LCE22_RS21695 (LCE22_21695)	rraA	4500274..4500759 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
LCE22_RS21700 (LCE22_21700)	zapB	4500844..4501089 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=533482 LCE22_RS21670 WP_000644904.1 4495148..4496173(+) (cytR) [Escherichia coli strain NDM4]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=533482 LCE22_RS21670 WP_000644904.1 4495148..4496173(+) (cytR) [Escherichia coli strain NDM4]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628