Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JOJ89_RS03040 Genome accession   NZ_CP069296
Coordinates   587669..588481 (+) Length   270 a.a.
NCBI ID   WP_203289555.1    Uniprot ID   -
Organism   Metabacillus sp. cB07     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 582669..593481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JOJ89_RS03015 - 583630..583812 (-) 183 WP_203289551.1 YfhD family protein -
  JOJ89_RS03020 - 584255..584383 (-) 129 WP_081414248.1 YfhE family protein -
  JOJ89_RS03025 - 584491..585048 (-) 558 WP_203289552.1 GNAT family protein -
  JOJ89_RS03030 - 585450..586580 (-) 1131 WP_203289553.1 amidohydrolase -
  JOJ89_RS03035 - 586604..587506 (-) 903 WP_203289554.1 TIGR01777 family oxidoreductase -
  JOJ89_RS03040 recX 587669..588481 (+) 813 WP_203289555.1 recombination regulator RecX Regulator
  JOJ89_RS03045 - 588487..589143 (-) 657 WP_203289556.1 SDR family oxidoreductase -
  JOJ89_RS03050 - 589215..589556 (+) 342 WP_203289557.1 YfhH family protein -
  JOJ89_RS03055 - 589594..589752 (-) 159 WP_081414247.1 YpzG family protein -
  JOJ89_RS03060 - 589785..589946 (-) 162 WP_029285938.1 small, acid-soluble spore protein K -
  JOJ89_RS03065 - 590046..590315 (+) 270 WP_029285940.1 YfhJ family protein -
  JOJ89_RS03070 - 590350..591330 (-) 981 WP_203289558.1 metal-dependent hydrolase -
  JOJ89_RS03075 mutY 591565..592659 (+) 1095 WP_203289559.1 A/G-specific adenine glycosylase -
  JOJ89_RS03080 - 592688..592912 (-) 225 WP_029285946.1 hypothetical protein -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 31482.88 Da        Isoelectric Point: 6.8982

>NTDB_id=533379 JOJ89_RS03040 WP_203289555.1 587669..588481(+) (recX) [Metabacillus sp. cB07]
MPTISKITTQKSSEERFNVFLNDGKGEKFAFSVDQNVLLKFGLKKGLELDEMEILEIQYGDSVKKAFNKAIEFLGFRMRS
EKETADMLLKKEYPESVVTEVIHQLRHYKYVNDSEFADAFVRTHWKTGGKGPGVIKRELSLKGIDKATAEKALEQYTKED
QIEQAMVHAEKTVRKEAKSSTVQTKQKIEQTLLRKGFNFDVISIVTEEMTYENNDDEEYQSLVKQAEKLQRKYAKEKPSA
YRLKMKQALYRKGFQIDMIERFLNEEEEQD

Nucleotide


Download         Length: 813 bp        

>NTDB_id=533379 JOJ89_RS03040 WP_203289555.1 587669..588481(+) (recX) [Metabacillus sp. cB07]
ATGCCAACAATATCGAAAATAACGACTCAAAAGAGCAGTGAAGAACGGTTTAATGTGTTTTTGAATGATGGCAAAGGTGA
AAAATTCGCCTTCAGCGTCGACCAGAACGTTCTATTAAAGTTTGGCCTGAAAAAAGGCCTTGAACTGGATGAGATGGAGA
TTCTCGAGATCCAGTACGGGGATTCGGTCAAAAAGGCGTTTAACAAAGCGATTGAATTCCTCGGATTCAGAATGAGATCA
GAGAAGGAAACGGCCGATATGCTTTTGAAAAAAGAGTACCCTGAATCGGTTGTGACAGAGGTTATCCATCAGCTTCGGCA
TTATAAATACGTAAATGACAGTGAGTTCGCGGATGCATTTGTGCGGACGCACTGGAAAACCGGGGGAAAAGGACCGGGTG
TAATTAAAAGGGAGCTTTCCTTAAAAGGCATTGATAAAGCAACGGCGGAAAAGGCGTTGGAGCAGTATACAAAAGAGGAT
CAGATTGAACAGGCAATGGTCCATGCCGAGAAAACGGTAAGAAAAGAAGCAAAAAGCTCGACTGTTCAGACGAAGCAGAA
AATAGAACAGACCCTGCTTCGAAAAGGGTTCAATTTTGATGTGATTTCAATCGTCACGGAAGAAATGACGTATGAGAACA
ATGATGATGAAGAATATCAGTCTCTGGTGAAGCAGGCAGAAAAACTTCAGCGGAAGTACGCGAAAGAAAAGCCATCTGCA
TACCGGCTAAAAATGAAGCAGGCGCTATACAGAAAAGGGTTCCAGATAGACATGATCGAACGGTTCCTGAATGAAGAAGA
GGAGCAGGACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(88-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

53.558

98.889

0.53