Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H8R29_RS16980 Genome accession   NZ_CP069288
Coordinates   3323411..3324361 (-) Length   316 a.a.
NCBI ID   WP_013057891.1    Uniprot ID   A0A0B6AV51
Organism   Priestia megaterium strain ATCC 14581     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3318411..3329361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8R29_RS16960 (H8R29_16965) - 3319466..3320308 (-) 843 WP_034650592.1 manganese catalase family protein -
  H8R29_RS16965 (H8R29_16970) - 3320739..3321677 (-) 939 WP_370511587.1 siderophore ABC transporter substrate-binding protein -
  H8R29_RS16970 (H8R29_16975) - 3321719..3322477 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  H8R29_RS16975 (H8R29_16980) - 3322471..3323418 (-) 948 WP_016764832.1 iron chelate uptake ABC transporter family permease subunit -
  H8R29_RS16980 (H8R29_16985) ceuB 3323411..3324361 (-) 951 WP_013057891.1 ABC transporter permease Machinery gene
  H8R29_RS16985 (H8R29_16990) - 3324760..3325566 (-) 807 WP_034650589.1 cell wall hydrolase -
  H8R29_RS16990 (H8R29_16995) - 3325929..3326183 (+) 255 WP_013057893.1 hypothetical protein -
  H8R29_RS16995 (H8R29_17000) - 3326265..3326429 (-) 165 WP_013057894.1 hypothetical protein -
  H8R29_RS17000 (H8R29_17005) - 3326747..3327091 (-) 345 WP_034650586.1 hypothetical protein -
  H8R29_RS17005 (H8R29_17010) - 3327134..3328165 (-) 1032 WP_016764835.1 zinc-binding dehydrogenase -
  H8R29_RS17010 (H8R29_17015) - 3328171..3329217 (-) 1047 WP_016764836.1 galactitol-1-phosphate 5-dehydrogenase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35037.32 Da        Isoelectric Point: 9.9188

>NTDB_id=533345 H8R29_RS16980 WP_013057891.1 3323411..3324361(-) (ceuB) [Priestia megaterium strain ATCC 14581]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=533345 H8R29_RS16980 WP_013057891.1 3323411..3324361(-) (ceuB) [Priestia megaterium strain ATCC 14581]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCGCTAGTCGGTTTAATGCTCGGCAGTATCGTAAGTTCCTTAGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
TCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATTGTAAACATTGGATTAGTCATTGTGTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATTCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTGGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGCTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B6AV51

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.318

95.57

0.5