Detailed information NTG0533319

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LCE24_RS23035
• Genome accession: NZ_CP083869
• Coordinates: 4494058..4495083 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NDM6
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4489058..4500083

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LCE24_RS23015 (LCE24_23015)	metJ	4490119..4490436 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LCE24_RS23020 (LCE24_23020)	yiiX	4490620..4491228 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
LCE24_RS23025 (LCE24_23025)	rpmE	4491289..4491501 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LCE24_RS23030 (LCE24_23030)	priA	4491704..4493902 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
LCE24_RS23035 (LCE24_23035)	cytR	4494058..4495083 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LCE24_RS23040 (LCE24_23040)	ftsN	4495175..4496134 (+)	960	WP_000068828.1	cell division protein FtsN	-
LCE24_RS23045 (LCE24_23045)	hslV	4496227..4496757 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LCE24_RS23050 (LCE24_23050)	hslU	4496767..4498098 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
LCE24_RS23055 (LCE24_23055)	menA	4498165..4499091 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LCE24_RS23060 (LCE24_23060)	rraA	4499184..4499669 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
LCE24_RS23065 (LCE24_23065)	zapB	4499754..4499999 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=533319 LCE24_RS23035 WP_000644904.1 4494058..4495083(+) (cytR) [Escherichia coli strain NDM6]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=533319 LCE24_RS23035 WP_000644904.1 4494058..4495083(+) (cytR) [Escherichia coli strain NDM6]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628