Detailed information NTG0533210

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: JQR77_RS05370
• Genome accession: NZ_CP069275
• Coordinates: 1038438..1039319 (-)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain EG007
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1033438..1044319

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQR77_RS05345 (JQR77_05340)	vicR	1034141..1034848 (-)	708	WP_011681206.1	response regulator YycF	Regulator
JQR77_RS05350 (JQR77_05345)	-	1035375..1036142 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
JQR77_RS05355 (JQR77_05350)	-	1036154..1036987 (+)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
JQR77_RS05360 (JQR77_05355)	-	1037005..1037703 (+)	699	WP_002953144.1	amino acid ABC transporter permease	-
JQR77_RS05365 (JQR77_05360)	-	1037715..1038365 (+)	651	WP_014608375.1	amino acid ABC transporter permease	-
JQR77_RS05370 (JQR77_05365)	endA	1038438..1039319 (-)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
JQR77_RS05375 (JQR77_05370)	-	1039381..1039569 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
JQR77_RS05380 (JQR77_05375)	murA	1039571..1040842 (-)	1272	WP_023909694.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
JQR77_RS05385 (JQR77_05380)	-	1040912..1041148 (-)	237	WP_002946959.1	DUF1146 family protein	-
JQR77_RS05390 (JQR77_05385)	galE	1041336..1042349 (-)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
JQR77_RS05395	-	1042364..1043176 (-)	813	WP_023909695.1	hypothetical protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=533210 JQR77_RS05370 WP_011681210.1 1038438..1039319(-) (endA) [Streptococcus thermophilus strain EG007]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=533210 JQR77_RS05370 WP_011681210.1 1038438..1039319(-) (endA) [Streptococcus thermophilus strain EG007]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594