Detailed information NTG0533157

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: JNO62_RS15565
• Genome accession: NZ_CP069245
• Coordinates: 3348562..3349707 (+)
• Length: 381 a.a.
• NCBI ID: WP_111374555.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain PeaFJ1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3343562..3354707

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNO62_RS15540 (JNO62_15445)	-	3343918..3344166 (-)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-
JNO62_RS15545 (JNO62_15450)	coaD	3344217..3344723 (-)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
JNO62_RS15550 (JNO62_15455)	rsmD	3344919..3345566 (-)	648	WP_016724254.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
JNO62_RS15555 (JNO62_15460)	-	3345647..3346990 (-)	1344	WP_011000351.1	M16 family metallopeptidase	-
JNO62_RS15560 (JNO62_15465)	-	3346990..3348501 (-)	1512	WP_028852563.1	M16 family metallopeptidase	-
JNO62_RS15565 (JNO62_15470)	pilA	3348562..3349707 (+)	1146	WP_111374555.1	signal recognition particle-docking protein FtsY	Machinery gene
JNO62_RS15570 (JNO62_15475)	-	3349704..3350342 (-)	639	WP_011000348.1	LysE/ArgO family amino acid transporter	-
JNO62_RS15575 (JNO62_15480)	maiA	3350339..3350989 (-)	651	WP_019717483.1	maleylacetoacetate isomerase	-
JNO62_RS15580 (JNO62_15485)	-	3350993..3351694 (-)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
JNO62_RS15585 (JNO62_15490)	-	3351842..3352468 (+)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
JNO62_RS15590 (JNO62_15495)	-	3352745..3354007 (+)	1263	WP_011000344.1	CmpA/NrtA family ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40331.56 Da
• Isoelectric Point: 5.8101

>NTDB_id=533157 JNO62_RS15565 WP_111374555.1 3348562..3349707(+) (pilA) [Ralstonia pseudosolanacearum strain PeaFJ1]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPASVATPVPTPAPAPVAAPVAVPDTPAAPAALDMQADDIETVPTPPVV
EQARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALR
DLLIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVV
AQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKA
FDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1146 bp

>NTDB_id=533157 JNO62_RS15565 WP_111374555.1 3348562..3349707(+) (pilA) [Ralstonia pseudosolanacearum strain PeaFJ1]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCCCCGGCCTCGGTTGCCACCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGCCCCGGTCGCCG
TGCCGGATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTG
GAGCAGGCGCGCAAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGT
CGGCGTGAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCG
AGTACCTGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGC
GACCTGCTCATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGC
GGGCGTCAACGGTGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGC
TGGCCGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTG
GCGCAGGAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCAT
GGCCGACACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAG
CGATGGCGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCC
TTCGACGATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAAGGCGGCATCCTGGCCGCCAT
CGCGCGGCAGCGGCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCG
AATTCGCCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (181-381)

• SRP54-type protein, helical bundle domain (SRP54_N) (100-161)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.404	100	0.572