Detailed information NTG0533118

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K9O95_RS16750
• Genome accession: NZ_CP083701
• Coordinates: 3417117..3418142 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain SUISSEKPC3NDM5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3412117..3423142

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K9O95_RS16725 (K9O95_16740)	metJ	3412554..3412871 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
K9O95_RS16730 (K9O95_16745)	yiiX	3413055..3413663 (+)	609	WP_106495437.1	YiiX family permuted papain-like enzyme	-
K9O95_RS16735 (K9O95_16750)	-	3413670..3414293 (+)	624	WP_000720774.1	TIGR02117 family protein	-
K9O95_RS16740 (K9O95_16755)	rpmE	3414348..3414560 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
K9O95_RS16745 (K9O95_16760)	priA	3414763..3416961 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
K9O95_RS16750 (K9O95_16765)	cytR	3417117..3418142 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K9O95_RS16755 (K9O95_16770)	ftsN	3418234..3419193 (+)	960	WP_000068828.1	cell division protein FtsN	-
K9O95_RS16760 (K9O95_16775)	hslV	3419286..3419816 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K9O95_RS16765 (K9O95_16780)	hslU	3419826..3421157 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
K9O95_RS16770 (K9O95_16785)	menA	3421224..3422150 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K9O95_RS16775 (K9O95_16790)	rraA	3422243..3422728 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K9O95_RS16780 (K9O95_16795)	zapB	3422813..3423058 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=533118 K9O95_RS16750 WP_000644904.1 3417117..3418142(+) (cytR) [Escherichia coli strain SUISSEKPC3NDM5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=533118 K9O95_RS16750 WP_000644904.1 3417117..3418142(+) (cytR) [Escherichia coli strain SUISSEKPC3NDM5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628