Detailed information NTG0533064

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: JQC90_RS06515
• Genome accession: NZ_CP069219
• Coordinates: 1345866..1346840 (+)
• Length: 324 a.a.
• NCBI ID: WP_001831109.1
• Uniprot ID: A0A9Q5JKD6
• Organism: Staphylococcus epidermidis strain Z0118SE0272
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1340866..1351840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQC90_RS06480	rpmG	1341346..1341495 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
JQC90_RS06485	-	1341678..1342229 (+)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
JQC90_RS06490	-	1342230..1343690 (+)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
JQC90_RS06495	-	1343674..1343874 (+)	201	WP_001831138.1	YqgQ family protein	-
JQC90_RS06500	-	1343874..1344860 (+)	987	WP_001831113.1	ROK family glucokinase	-
JQC90_RS06505	-	1344860..1345186 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
JQC90_RS06510	-	1345186..1345809 (+)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
JQC90_RS06515	comGA	1345866..1346840 (+)	975	WP_001831109.1	competence type IV pilus ATPase ComGA	Machinery gene
JQC90_RS06520	comGB	1346812..1347879 (+)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
JQC90_RS06525	comGC	1347897..1348214 (+)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
JQC90_RS06530	comGD	1348204..1348641 (+)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
JQC90_RS06535	-	1348628..1348921 (+)	294	WP_001831116.1	hypothetical protein	-
JQC90_RS06540	-	1348845..1349336 (+)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
JQC90_RS06545	-	1349501..1350013 (+)	513	WP_002440040.1	shikimate kinase	-
JQC90_RS06550	gcvT	1350231..1351322 (+)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37330.44 Da
• Isoelectric Point: 8.8174

>NTDB_id=533064 JQC90_RS06515 WP_001831109.1 1345866..1346840(+) (comGA) [Staphylococcus epidermidis strain Z0118SE0272]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=533064 JQC90_RS06515 WP_001831109.1 1345866..1346840(+) (comGA) [Staphylococcus epidermidis strain Z0118SE0272]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701