Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   U722_RS00565 Genome accession   NC_023073
Coordinates   108993..110075 (+) Length   360 a.a.
NCBI ID   WP_003156401.1    Uniprot ID   A0AAI8HS26
Organism   Bacillus amyloliquefaciens LFB112     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 103993..115075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U722_RS00550 (U722_00560) - 103996..105087 (+) 1092 WP_003156398.1 protein arginine kinase -
  U722_RS00555 (U722_00565) clpC 105084..107516 (+) 2433 WP_007410388.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  U722_RS00560 (U722_00570) radA/sms 107610..108989 (+) 1380 WP_014304212.1 DNA repair protein RadA Machinery gene
  U722_RS00565 (U722_00575) disA 108993..110075 (+) 1083 WP_003156401.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  U722_RS00570 (U722_00580) - 110189..111289 (+) 1101 WP_003156403.1 PIN/TRAM domain-containing protein -
  U722_RS00575 (U722_00585) ispD 111302..112000 (+) 699 WP_003156405.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  U722_RS00580 (U722_00590) ispF 111993..112469 (+) 477 WP_003156407.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  U722_RS00585 (U722_00595) gltX 112561..114012 (+) 1452 WP_015388783.1 glutamate--tRNA ligase -
  U722_RS00590 (U722_00600) cysE 114324..114977 (+) 654 WP_003156410.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40671.21 Da        Isoelectric Point: 5.5321

>NTDB_id=53297 U722_RS00565 WP_003156401.1 108993..110075(+) (disA) [Bacillus amyloliquefaciens LFB112]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATVEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=53297 U722_RS00565 WP_003156401.1 108993..110075(+) (disA) [Bacillus amyloliquefaciens LFB112]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATTCTGCAGTTCGTTGCACCGGGCACCCCGCT
CAGAGCCGGGATAGAGAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAATGATAAGGTAAAGCAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGTGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATCGCCATTTCTGAGCGCAGAAATG
TCATTACGTTATATCAGGACAGCATGAAGTACACACTAAAGGACATAGGTTTTATTTTAACAAAGGCAAATCAGGCCATT
CAAACGCTCGAGAAGTATAAAACCATTTTAGACAAAACAATTACGGCTCTAAACGCATTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCTGTCATGCATCGGTATGAAATGGTGCTCCGAATAAAAAATGAAATCAATATGTATATTAAAG
AACTCGGAACGGAAGGTCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGACATGGAAGAAGAGGCGGCACTTTTC
ATCAAAGACTATGTCAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTCCAGGATATGTCCAGCTATGATCT
GCTGGATGATTCCATTCTGTTTAAACTGCTTGGATACCCGGCTTCTACGAATCTTGATGATTATGTGCTCCCGAGAGGCT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCGTTCGGATTTTTGCCAAGC
ATAACGGAAGCCACTGTAGAAGAGCTTGATGATGTCGAGGGTATCGGCGAAGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTTCAGGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AAI8HS26

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.444

100

0.944


Multiple sequence alignment