Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxP   Type   Regulator
Locus tag   JOS67_RS23910 Genome accession   NZ_CP069197
Coordinates   1742592..1743689 (-) Length   365 a.a.
NCBI ID   WP_005397733.1    Uniprot ID   A0AA92R960
Organism   Vibrio diabolicus strain SLV18     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context

Location: 1737592..1748689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JOS67_RS23895 (JOS67_23900) - 1738166..1739224 (-) 1059 WP_053807920.1 HlyD family secretion protein -
  JOS67_RS23900 (JOS67_23905) - 1739260..1739715 (-) 456 WP_005397727.1 MarR family transcriptional regulator -
  JOS67_RS23905 (JOS67_23910) luxQ 1740016..1742592 (-) 2577 WP_005397731.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ -
  JOS67_RS23910 (JOS67_23915) luxP 1742592..1743689 (-) 1098 WP_005397733.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  JOS67_RS23915 (JOS67_23920) - 1744010..1744330 (-) 321 WP_203347589.1 GIY-YIG nuclease family protein -
  JOS67_RS23920 (JOS67_23925) - 1744327..1744977 (-) 651 WP_046875879.1 YceH family protein -
  JOS67_RS23925 (JOS67_23930) - 1745143..1745346 (-) 204 WP_031780656.1 hypothetical protein -
  JOS67_RS23930 (JOS67_23935) - 1745588..1745902 (+) 315 WP_005373603.1 DUF496 family protein -
  JOS67_RS23935 (JOS67_23940) - 1746024..1747361 (+) 1338 WP_053807924.1 MATE family efflux transporter -

Sequence

Protein


Download         Length: 365 a.a.        Molecular weight: 41598.94 Da        Isoelectric Point: 4.9826

>NTDB_id=532850 JOS67_RS23910 WP_005397733.1 1742592..1743689(-) (luxP) [Vibrio diabolicus strain SLV18]
MKKALVFSLMSMATVAPIAQATQVLNGYWAYQEFLDQFPEQKQLTNALADAVRETPVPVERDKKRPLKISVVYPGQQISD
YWIRNIDAFEQRLDKLDIDYQLNQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSKKTKLILQNI
TTPVRDWEDHQPFLYVGFDHAEGSRELAVEFGKRFPKQSHYSVLYFSEGYISDIRGNTFINQVNRDNNFELQSAYYTKAT
KQSGYEAAKASLEKYPDVDFIYACSTDVALGAVDALKELGREDVMINGWGGGSAELEALSKGELDVTVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide


Download         Length: 1098 bp        

>NTDB_id=532850 JOS67_RS23910 WP_005397733.1 1742592..1743689(-) (luxP) [Vibrio diabolicus strain SLV18]
ATGAAAAAAGCGTTAGTATTCTCCCTGATGTCAATGGCCACTGTCGCGCCGATAGCGCAAGCCACTCAAGTCCTCAATGG
GTATTGGGCATATCAAGAATTTTTAGACCAGTTTCCAGAACAGAAGCAGTTAACGAATGCGTTGGCTGACGCCGTGCGAG
AGACTCCTGTTCCGGTTGAAAGAGACAAAAAACGTCCGTTAAAAATTTCTGTGGTTTATCCAGGTCAACAGATTTCGGAT
TATTGGATTCGAAATATCGACGCATTTGAACAGCGTTTAGATAAACTCGATATCGACTATCAACTTAATCAAGTATTTAC
CCGTCCCAACGCAGATATTAAGCAACAAAGTTTGTCTTTAATGGAAGCGCTGAAGAGCAACTCCGATTATCTGATTTTCA
CTCTCGATACCACTAGGCATCGCAAGTTTGTTGAGCACGTCTTAGACTCAAAGAAAACCAAGTTGATCTTACAAAATATC
ACTACACCGGTAAGAGATTGGGAGGATCACCAACCGTTCCTTTATGTTGGTTTTGATCATGCTGAAGGCAGCCGTGAGCT
TGCCGTGGAGTTTGGTAAGCGTTTTCCAAAACAGAGCCATTATAGTGTGCTCTACTTTTCAGAAGGGTATATCAGCGATA
TCAGAGGCAATACCTTTATCAATCAAGTCAACCGTGATAACAACTTTGAACTACAATCTGCTTACTATACCAAAGCGACA
AAGCAGTCTGGGTACGAAGCAGCAAAAGCGAGTTTGGAAAAATACCCTGACGTCGATTTTATTTATGCGTGTTCTACAGA
TGTGGCGCTAGGGGCTGTTGATGCGCTGAAAGAATTAGGGCGTGAAGATGTCATGATCAACGGCTGGGGTGGCGGCTCTG
CAGAATTAGAAGCGCTTTCGAAAGGGGAGTTAGACGTTACCGTTATGCGTATGAACGATGATACTGGCATTGCAATGGCA
GAAGCGATTAAGTGGGATCTTGAAGGGAAACCCGTTCCAACCGTTTATTCTGGTGATTTTGAAGTCGTCACGAAATCTGA
TTCTCCAGAAAGAATTGAAGCATTAAGAAAACGCGCATTTAGATATTCAGACAATTGA

Domains

Predicted by InterproScan.

Periplasmic binding protein domain (Peripla_BP_4)

(69-324)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

64.286

99.726

0.641