Detailed information NTG0532826

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: JOS67_RS03695
• Genome accession: NZ_CP069195
• Coordinates: 668580..671966 (-)
• Length: 1128 a.a.
• NCBI ID: WP_203346943.1
• Uniprot ID: -
• Organism: Vibrio diabolicus strain SLV18
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 663580..676966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JOS67_RS03680 (JOS67_03675)	-	663935..664960 (-)	1026	WP_005394707.1	ABC transporter permease	-
JOS67_RS03685 (JOS67_03680)	-	664963..665949 (-)	987	WP_005394705.1	ABC transporter permease	-
JOS67_RS03690 (JOS67_03685)	-	666120..667802 (-)	1683	WP_203346942.1	ABC transporter substrate-binding protein	-
JOS67_RS03695 (JOS67_03690)	chiS	668580..671966 (-)	3387	WP_203346943.1	response regulator	Regulator
JOS67_RS03700 (JOS67_03695)	rsmC	672193..673218 (-)	1026	WP_005394693.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
JOS67_RS03705 (JOS67_03700)	-	673294..674379 (-)	1086	WP_048625951.1	AI-2E family transporter	-
JOS67_RS03710 (JOS67_03705)	hemL	674726..676021 (-)	1296	WP_203346944.1	glutamate-1-semialdehyde 2,1-aminomutase	-
JOS67_RS03715 (JOS67_03710)	erpA	676268..676609 (+)	342	WP_005380031.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127035.68 Da
• Isoelectric Point: 5.4948

>NTDB_id=532826 JOS67_RS03695 WP_203346943.1 668580..671966(-) (chiS) [Vibrio diabolicus strain SLV18]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRKNAQQRYIEGSGDQIKTSTLPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGPYKDSALGKTFKRLADDVTERRKVNEDYTPVIVSDFELEGGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLAADANRESSINTLLVGNDHQPRTINTKQDDIKNSLEVIDKALSGAFGVGTYTNGLGEE
IIAAYAPIETRGVIWALVVQLPEKEAFARIHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDD
TTFNTVRKDEIGRLALSFERMQRSIREKIQTIKKQNEELESNIQIIQKQNDELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLASGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSSHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDHVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQTTQTLAAHGHFQIPEIDVENNEDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASQAEMRHMENKILESELRQRAAIEASLLETQGRLLEQLE
SAPEAIICLREDKRIRFANEAACKLFKRNLEQLKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREILVDAMTHA
LEYWESVTGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=532826 JOS67_RS03695 WP_203346943.1 668580..671966(-) (chiS) [Vibrio diabolicus strain SLV18]
ATGTTTAAATTCTACAAAAAACAGAAATTTAAGCGCCTTCAGAGTACACTGATGACCGCATTTCTGGTGCTCAGTATCAC
ACCTCTTACTATTACTGCGATCTTTTTCCTACAGTCCCACAGTAAAGATCTGCAAGAACAAAGCACCTCACATTTGTTGT
CTGTTCGAGATACAAAACAACAGCAAATTATCGACTACTTTGAGGCGCGGGAAACCGAAGTCATGGGCTTTGTGCGCTCT
GAACTGGCTTACGCCAGTGGTGGTCGATTCTACGGTCTCGTCAATGCTTTTAGTCGTTTAGGTAATGACATTGAAGAATC
TCGTAAAAATGCCCAACAGCGCTACATTGAAGGCAGCGGAGATCAAATCAAAACGTCAACGTTACCCGAGTCTTCCAACT
ATGTCGGAAGTGAACGTTACCGACTCTTACATAAACGTTACCACTGGGCCTACTTGGAGCTCCTCAAGCGCTCTGATTTT
AATGATATTTTGCTGGTCGATATCAACGGTAATGTCACCTACTCGATCAACAAAGACGATAACTACGGAACAAACTTATT
ATCAGGCCCCTACAAAGACTCAGCACTTGGCAAAACCTTCAAGCGTCTAGCTGATGACGTCACTGAACGCCGTAAGGTGA
ATGAAGACTACACCCCTGTGATTGTGTCTGATTTCGAACTGGAAGGTGGTAAACAAGTCGCTTGGTTAGGTGCTCCAATT
GTTCAGCAAGGCTACCTACACAGCTATGCTATGTTCCGCTTACCAAATAATGGCATCACGAAGTTAGCCGCAGACGCCAA
CCGAGAGTCATCCATTAACACCTTACTGGTTGGAAATGATCACCAACCTCGCACAATTAACACCAAGCAAGATGACATTA
AGAACAGCTTAGAAGTGATCGATAAAGCACTCTCTGGTGCATTTGGCGTCGGCACTTACACGAACGGTTTAGGTGAAGAG
ATCATCGCTGCTTATGCACCGATTGAAACGCGTGGTGTTATTTGGGCACTCGTCGTGCAATTACCAGAAAAAGAAGCTTT
CGCTCGTATTCATCAACTAGAAAAACTGTTTGTTATCGCCATGCTGATCGCCATCATTCTAGTGGTAATCGCTTCCCATT
ATTTATCAAACTTTATTACTTCTCCGTTGCTGAAGTTAACTTGGGCTGCCGAAAAAGTGTCTGCCGGAGATCTTGATGAC
ACCACCTTTAATACGGTTCGCAAAGATGAAATTGGCCGTCTTGCGCTGAGTTTTGAACGAATGCAGCGCTCTATTCGAGA
GAAAATTCAAACCATTAAGAAGCAAAATGAAGAGCTCGAGAGCAACATACAGATCATTCAAAAACAAAATGATGAACTGC
AATTGGCCGACAAACTTAAAGATGAGTTCTTAGCCACCACTTCTCATGAACTCCGCACACCATTGCACGGCATGGTCGGA
ATCGCTGAGACCTTAGCGTCCGGAGCTAACGGTGCTATCCCTGCTAGCCAAAAATATCAGCTTGATATCATCATTAAAAG
TGGGCAACGTCTCGCAAACCTTGTTGATGACTTATTGGATTATCATAAAATGCGTTACGGAAGCATGGATATCCAGAAGT
CAGCGGTGAGTTTAGCCAGTGCAACGCGACTGGTACTAGAGCTTTCCAGTCATTTACTCGGAAATAAAACCATCCGTATC
ATCAACCAAGTACCAGCGGATTTGAAAGCAGTGTCTGCCGATCCTCAACGCCTTGAACAAGTGTTATATAACCTGATCGG
TAATGCGATTAAGTACACCTCTGAAGGTAAAATCGTTATCTCCGCCAATGTAGTTGATGATCATGTTCGTGTGCAAGTTG
TGGATACTGGGCAAGGTATTCCCGCAGAACATCTTGAACATATTTTCGAACCACTTATCCAAGCGGGACAAGACGCAAGT
CGCTATCGTCAAGGTGCGGGGCTCGGGCTTTCGATTAGCCGTCAATTGATTGAGTTGATGGGTGGCTCGTTATACGTCAG
CAGCCAGCCTATGGTCGGCACCACCTTCAGTTTCACGTTACCACTTGCCAGTGAAGAAGAGATCCAAACAACTCAAACCC
TTGCAGCGCACGGACACTTCCAGATTCCTGAAATCGATGTAGAGAACAATGAAGACTTATCACTGCCAGAGAATCCAGAC
GGCCCGTTACTGTATGTCGCTGACGATGAGCCAGTAAACCTGCGTGTGCTTGAGAGCTTCTTACGTTTAGAGGGCTATCG
CGTACGTACCGTCTCTGATGGACCAGAAACATTAGCACTCGTTGAGCAGGAAAAACCGGAACTCCTGTTATTGGATATCA
TGATGCCAGGCATGAGCGGCTATCAAGTCTGCAGTGAATTACGTGAAACTTATGACCATGCCGAGCTACCTATCATTATG
CTCACCGCGCTTAGTCAAACAGAAGATCGTGTACGAGGCTTTGAAGCAGGAGCCAACGACTATTTGTCTAAGCCATTCAA
TAAACAAGAGCTAGCTGCACGCATCCAAGCGCACTTAACGGCAAGCCAAGCTGAAATGCGCCACATGGAGAATAAGATAC
TTGAATCTGAACTTCGCCAACGAGCGGCTATAGAGGCAAGCTTATTAGAAACTCAAGGGCGATTGTTGGAACAACTGGAA
TCGGCTCCTGAAGCGATTATCTGTTTGCGTGAAGATAAACGTATCCGTTTTGCTAATGAAGCTGCTTGCAAGCTATTCAA
GCGTAACTTAGAACAATTAAAACGTTCATCTGCCGATGAGTTGATTGCACCTAAGTATCTGACCGTCAAACAACCTCATT
ACTGTGGCAAGATTGATATCTATATTGAAGATATTCGTCAAAACATCGAAGCAGACATTCTTAAACTACCTGAAGGCTCA
GGCTTAGATGTCATGTATATCTTTAATGTTGGCGGAGGAGCCAATGCCGCTCGCATACACAACCTAGAAACCGCCGTAGA
GGTGCTTTCAAGTTATGCTTTTGATGGCGATAAAGACCAGCTGCAGAAGCTGAAAGAACTCGGTGGAGAGTTTACACGTC
TTGCAGACAAAGCGCTTGGTAACAAAAAAGACAAACAAGAGCTAATGCGAGAAATTCTGGTCGACGCAATGACACATGCC
TTAGAGTATTGGGAGTCAGTCACTGGTGAAAGTAAATTCGCATTTGCCGAACAAAGTGGCTTATGGCGCGTTTATCTTGA
CCGTAGCACTCTGCAAACACGCACTTTGGATAAATACATGCGTATAGAAACGCTGCCGAAAACGCCACGTTGGAGAACGG
TATTGAGCTCGATAGAATTCATCCTTGAACACTGTAAAGAACAGAGTCCTGAGCGTGCGTACATCGAAGCTCAACGAGAT
AAACTACAGCGACTGTTGACCAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.439	100	0.765