Detailed information NTG0532667

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K9U07_RS13250
• Genome accession: NZ_CP083512
• Coordinates: 2718174..2719157 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196488.1
• Uniprot ID: -
• Organism: Escherichia coli strain elppa4
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2713174..2724157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K9U07_RS13230 (K9U07_13260)	ldrD	2714806..2714913 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K9U07_RS13235 (K9U07_13265)	-	2715289..2715396 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K9U07_RS13240 (K9U07_13270)	yhjV	2715872..2717143 (+)	1272	WP_001316716.1	aromatic amino acid transport family protein	-
K9U07_RS13245 (K9U07_13275)	dppF	2717173..2718177 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K9U07_RS13250 (K9U07_13280)	amiE	2718174..2719157 (-)	984	WP_001196488.1	dipeptide ABC transporter ATP-binding protein	Regulator
K9U07_RS13255 (K9U07_13285)	dppC	2719168..2720070 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K9U07_RS13260 (K9U07_13290)	dppB	2720080..2721099 (-)	1020	WP_000938853.1	dipeptide ABC transporter permease DppB	-
K9U07_RS13265 (K9U07_13295)	dppA	2721250..2722857 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35859.38 Da
• Isoelectric Point: 6.7585

>NTDB_id=532667 K9U07_RS13250 WP_001196488.1 2718174..2719157(-) (amiE) [Escherichia coli strain elppa4]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLN
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=532667 K9U07_RS13250 WP_001196488.1 2718174..2719157(-) (amiE) [Escherichia coli strain elppa4]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATAAAGGTGCATCAGGGCGGTAATAAGAGCACTCGTCGTCAGCGGGCGATTGACC
TGTTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGTGTGATGATCGCGATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCACTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTAAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.905	96.33	0.404