Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MHHHKEFG_RS05445 Genome accession   NZ_CP069125
Coordinates   1120818..1121015 (+) Length   65 a.a.
NCBI ID   WP_003211983.1    Uniprot ID   -
Organism   Bacillus pumilus strain D5     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1115818..1126015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHHHKEFG_RS05415 (MHHHKEFG_01100) - 1116225..1116404 (+) 180 WP_034663316.1 YjzC family protein -
  MHHHKEFG_RS05420 (MHHHKEFG_01101) - 1116573..1117838 (+) 1266 WP_034663308.1 MFS transporter -
  MHHHKEFG_RS05425 (MHHHKEFG_01102) - 1117957..1118151 (-) 195 WP_003211779.1 YjzD family protein -
  MHHHKEFG_RS05430 (MHHHKEFG_01103) - 1118363..1119103 (+) 741 WP_060595993.1 hypothetical protein -
  MHHHKEFG_RS05435 (MHHHKEFG_01104) - 1119179..1119754 (+) 576 WP_066031042.1 nad binding enzyme -
  MHHHKEFG_RS05440 (MHHHKEFG_01105) med 1119845..1120807 (+) 963 WP_066031041.1 BMP family ABC transporter substrate-binding protein Regulator
  MHHHKEFG_RS05445 (MHHHKEFG_01106) comZ 1120818..1121015 (+) 198 WP_003211983.1 ComZ family protein Regulator
  MHHHKEFG_RS05450 (MHHHKEFG_01107) - 1121026..1121259 (-) 234 WP_034663296.1 hypothetical protein -
  MHHHKEFG_RS05455 (MHHHKEFG_01108) - 1121429..1122367 (+) 939 WP_066031040.1 beta-ketoacyl-ACP synthase III -
  MHHHKEFG_RS05460 (MHHHKEFG_01109) fabF 1122389..1123630 (+) 1242 WP_034663293.1 beta-ketoacyl-ACP synthase II -
  MHHHKEFG_RS05465 (MHHHKEFG_01110) - 1123708..1124502 (+) 795 WP_060595996.1 DUF2268 domain-containing protein -
  MHHHKEFG_RS05470 (MHHHKEFG_01111) - 1124671..1125651 (+) 981 WP_045210037.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7391.42 Da        Isoelectric Point: 4.1652

>NTDB_id=532372 MHHHKEFG_RS05445 WP_003211983.1 1120818..1121015(+) (comZ) [Bacillus pumilus strain D5]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLSLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=532372 MHHHKEFG_RS05445 WP_003211983.1 1120818..1121015(+) (comZ) [Bacillus pumilus strain D5]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCAAAAGAAGAATTAGATAAAGC
GGGTATTCAGCTTGAGCCCGAAGCTCTTCAGCCGCTTTTATCATTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GGAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677