Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MHHHKEFG_RS04055 Genome accession   NZ_CP069125
Coordinates   850225..851016 (+) Length   263 a.a.
NCBI ID   WP_060595806.1    Uniprot ID   -
Organism   Bacillus pumilus strain D5     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 845225..856016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHHHKEFG_RS04020 (MHHHKEFG_00819) - 845308..845856 (+) 549 WP_034665029.1 thioredoxin family protein -
  MHHHKEFG_RS04025 (MHHHKEFG_00820) - 846193..846660 (+) 468 WP_066031146.1 thiol-disulfide oxidoreductase DCC family protein -
  MHHHKEFG_RS04030 (MHHHKEFG_00821) - 846697..847953 (-) 1257 WP_066031145.1 transcriptional regulator -
  MHHHKEFG_RS04035 (MHHHKEFG_00822) - 848227..848814 (+) 588 WP_060595825.1 nitroreductase -
  MHHHKEFG_RS04040 (MHHHKEFG_00823) - 848854..849009 (-) 156 WP_034665021.1 YfhD family protein -
  MHHHKEFG_RS04045 - 849071..849181 (-) 111 WP_017358836.1 YfhE family protein -
  MHHHKEFG_RS04050 (MHHHKEFG_00825) - 849234..850130 (-) 897 WP_066031144.1 TIGR01777 family oxidoreductase -
  MHHHKEFG_RS04055 (MHHHKEFG_00826) recX 850225..851016 (+) 792 WP_060595806.1 recombination regulator RecX Regulator
  MHHHKEFG_RS04060 (MHHHKEFG_00827) - 851020..851334 (+) 315 WP_034665012.1 YfhH family protein -
  MHHHKEFG_RS04065 (MHHHKEFG_00828) - 851468..851641 (-) 174 WP_003217811.1 YpzG family protein -
  MHHHKEFG_RS04070 - 851667..851816 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  MHHHKEFG_RS04075 (MHHHKEFG_00830) - 851931..852203 (+) 273 WP_034665009.1 YfhJ family protein -
  MHHHKEFG_RS04080 (MHHHKEFG_00831) - 852494..853477 (+) 984 WP_034665005.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30575.00 Da        Isoelectric Point: 6.6674

>NTDB_id=532363 MHHHKEFG_RS04055 WP_060595806.1 850225..851016(+) (recX) [Bacillus pumilus strain D5]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVNQVLKLVRKEKNRSAKEIEQRIKLQLQRKGFSFAIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=532363 MHHHKEFG_RS04055 WP_060595806.1 850225..851016(+) (recX) [Bacillus pumilus strain D5]
ATGCCCTATATTACAAAAATCTCCGCTCAGAAAAACAATACAGAGCGGGTGAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCACGACTTAAAAAAAGGGAAAGAGCTGGACGAAGCAGATATCATTGAAATTC
AATTCGGTGATGCTGTGAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCCTACCGAATGAGATCGGTGAAAGAAGTG
ACCGATTATTTGACGAAAAAAGAAATTCCAGCGCCTGCTATTAGTGAAATTATACACAAATTAAAGCATTACAAGTATGT
AAATGATCTTGAATTTGCGGAAGCCTATGTAAGCACCCACCGTAAAACGAACAGCAAAGGGCCGTCCGTCCTGAAAAAAG
AGTTAAAGCTTAAAGGGATAGACGATGACACCATTGAACAAGCGCTATCGCAATATCCTGATGACTTACAGCTGGAGGAA
GCCGTCAATCAGGTTCTCAAGCTTGTGAGAAAAGAAAAGAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTTCA
GCTTCAGCGAAAGGGATTTTCGTTTGCGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTCTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAGTTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.118

100

0.631