Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JNE42_RS07320 Genome accession   NZ_CP069098
Coordinates   1423827..1424408 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain 63-2-2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1418827..1429408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE42_RS07295 (JNE42_07295) - 1419491..1420669 (+) 1179 WP_110487269.1 N-acetyldiaminopimelate deacetylase -
  JNE42_RS07300 (JNE42_07300) - 1420720..1420962 (+) 243 WP_003211408.1 YkuS family protein -
  JNE42_RS07305 (JNE42_07305) - 1420987..1421796 (-) 810 WP_058337402.1 mechanosensitive ion channel family protein -
  JNE42_RS07310 (JNE42_07310) ahpA 1422068..1422610 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  JNE42_RS07315 (JNE42_07315) - 1422887..1423345 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  JNE42_RS07320 (JNE42_07320) rok 1423827..1424408 (+) 582 WP_007498648.1 hypothetical protein Regulator
  JNE42_RS07325 (JNE42_07325) - 1424471..1425388 (-) 918 WP_203144295.1 sigmaE regulated sporulation protein -
  JNE42_RS07330 (JNE42_07330) - 1425472..1426053 (+) 582 WP_172793300.1 molybdenum cofactor guanylyltransferase -
  JNE42_RS07335 (JNE42_07335) - 1426083..1427102 (+) 1020 WP_203144296.1 MoeB/ThiF family adenylyltransferase -
  JNE42_RS07340 (JNE42_07340) glp 1427112..1428386 (+) 1275 WP_203144297.1 gephyrin-like molybdotransferase Glp -
  JNE42_RS07345 (JNE42_07345) mobB 1428368..1428895 (+) 528 WP_203144298.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  JNE42_RS07350 (JNE42_07350) - 1428888..1429379 (+) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=532320 JNE42_RS07320 WP_007498648.1 1423827..1424408(+) (rok) [Bacillus altitudinis strain 63-2-2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=532320 JNE42_RS07320 WP_007498648.1 1423827..1424408(+) (rok) [Bacillus altitudinis strain 63-2-2]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCGTTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCTGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782