Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   JNE42_RS07200 Genome accession   NZ_CP069098
Coordinates   1405348..1405809 (-) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus altitudinis strain 63-2-2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1400348..1410809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE42_RS07175 (JNE42_07175) - 1400952..1401836 (+) 885 WP_017359428.1 cation diffusion facilitator family transporter -
  JNE42_RS07180 (JNE42_07180) - 1401901..1402056 (-) 156 WP_155720694.1 hypothetical protein -
  JNE42_RS07185 (JNE42_07185) - 1402354..1402893 (+) 540 WP_039169112.1 RDD family protein -
  JNE42_RS07190 (JNE42_07190) - 1403019..1404329 (+) 1311 WP_007498688.1 MFS transporter -
  JNE42_RS07195 (JNE42_07195) - 1404403..1405311 (+) 909 WP_008348035.1 chemotaxis protein -
  JNE42_RS07200 (JNE42_07200) kre 1405348..1405809 (-) 462 WP_007498684.1 YkyB family protein Regulator
  JNE42_RS07205 (JNE42_07205) - 1406287..1406502 (-) 216 WP_008348016.1 hypothetical protein -
  JNE42_RS07210 (JNE42_07210) - 1406670..1406846 (+) 177 WP_173407972.1 hypothetical protein -
  JNE42_RS07215 (JNE42_07215) - 1406911..1408188 (-) 1278 WP_008348012.1 MFS transporter -
  JNE42_RS07220 (JNE42_07220) - 1408262..1408759 (-) 498 WP_041092399.1 L,D-transpeptidase family protein -
  JNE42_RS07225 (JNE42_07225) - 1408914..1409771 (-) 858 WP_203144294.1 metallophosphoesterase -
  JNE42_RS07230 (JNE42_07230) fadH 1409911..1410675 (+) 765 WP_019743904.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=532319 JNE42_RS07200 WP_007498684.1 1405348..1405809(-) (kre) [Bacillus altitudinis strain 63-2-2]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=532319 JNE42_RS07200 WP_007498684.1 1405348..1405809(-) (kre) [Bacillus altitudinis strain 63-2-2]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATCGGAGAT
TATTATTTTCATCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAATCGAGCGAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771