Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   JNE42_RS05560 Genome accession   NZ_CP069098
Coordinates   1094817..1095767 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain 63-2-2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1089817..1100767
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE42_RS05540 (JNE42_05540) - 1091055..1091537 (+) 483 WP_008348662.1 hypothetical protein -
  JNE42_RS05545 (JNE42_05545) - 1091568..1093007 (-) 1440 WP_186365893.1 PLP-dependent aminotransferase family protein -
  JNE42_RS05550 (JNE42_05550) - 1093150..1094319 (+) 1170 WP_203144230.1 MFS transporter -
  JNE42_RS05555 (JNE42_05555) - 1094382..1094660 (+) 279 WP_041507495.1 barstar family protein -
  JNE42_RS05560 (JNE42_05560) ceuB 1094817..1095767 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  JNE42_RS05565 (JNE42_05565) - 1095760..1096710 (+) 951 WP_019743340.1 iron chelate uptake ABC transporter family permease subunit -
  JNE42_RS05570 (JNE42_05570) - 1096701..1097459 (+) 759 WP_203144231.1 ABC transporter ATP-binding protein -
  JNE42_RS05575 (JNE42_05575) - 1097482..1098426 (+) 945 WP_203144232.1 siderophore ABC transporter substrate-binding protein -
  JNE42_RS05580 (JNE42_05580) - 1098763..1099719 (+) 957 WP_007499147.1 LCP family protein -
  JNE42_RS05585 (JNE42_05585) - 1099754..1100188 (-) 435 WP_045034715.1 hypothetical protein -
  JNE42_RS05590 (JNE42_05590) - 1100274..1100636 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=532307 JNE42_RS05560 WP_017366964.1 1094817..1095767(+) (ceuB) [Bacillus altitudinis strain 63-2-2]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=532307 JNE42_RS05560 WP_017366964.1 1094817..1095767(+) (ceuB) [Bacillus altitudinis strain 63-2-2]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATTATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGATGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494