Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JNE42_RS04565 Genome accession   NZ_CP069098
Coordinates   911322..912113 (+) Length   263 a.a.
NCBI ID   WP_058336507.1    Uniprot ID   -
Organism   Bacillus altitudinis strain 63-2-2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 906322..917113
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE42_RS04530 (JNE42_04530) - 906410..906958 (+) 549 WP_039962604.1 thioredoxin family protein -
  JNE42_RS04535 (JNE42_04535) - 907297..907764 (+) 468 WP_007496690.1 thiol-disulfide oxidoreductase DCC family protein -
  JNE42_RS04540 (JNE42_04540) - 907800..909056 (-) 1257 WP_008341668.1 transcriptional regulator -
  JNE42_RS04545 (JNE42_04545) - 909327..909914 (+) 588 WP_024720283.1 nitroreductase family protein -
  JNE42_RS04550 (JNE42_04550) - 909950..910105 (-) 156 WP_008341997.1 YfhD family protein -
  JNE42_RS04555 (JNE42_04555) - 910167..910277 (-) 111 WP_017358836.1 YfhE family protein -
  JNE42_RS04560 (JNE42_04560) - 910330..911226 (-) 897 WP_203144199.1 TIGR01777 family oxidoreductase -
  JNE42_RS04565 (JNE42_04565) recX 911322..912113 (+) 792 WP_058336507.1 recombination regulator RecX Regulator
  JNE42_RS04570 (JNE42_04570) - 912117..912431 (+) 315 WP_017358839.1 YfhH family protein -
  JNE42_RS04575 (JNE42_04575) - 912614..912787 (-) 174 WP_003217811.1 YpzG family protein -
  JNE42_RS04580 (JNE42_04580) - 912813..912962 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  JNE42_RS04585 (JNE42_04585) - 913079..913351 (+) 273 WP_017366871.1 YfhJ family protein -
  JNE42_RS04590 (JNE42_04590) - 913653..914636 (+) 984 WP_008341983.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30646.03 Da        Isoelectric Point: 7.0789

>NTDB_id=532302 JNE42_RS04565 WP_058336507.1 911322..912113(+) (recX) [Bacillus altitudinis strain 63-2-2]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQESYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=532302 JNE42_RS04565 WP_058336507.1 911322..912113(+) (recX) [Bacillus altitudinis strain 63-2-2]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCGTATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AGTTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTAAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAATCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGTTATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635