Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | JNE42_RS00590 | Genome accession | NZ_CP069098 |
| Coordinates | 108410..110845 (+) | Length | 811 a.a. |
| NCBI ID | WP_007496263.1 | Uniprot ID | A0A5K1N9Z5 |
| Organism | Bacillus altitudinis strain 63-2-2 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 103410..115845
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNE42_RS00575 (JNE42_00575) | - | 106281..106745 (+) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
| JNE42_RS00580 (JNE42_00580) | - | 106760..107317 (+) | 558 | WP_007496258.1 | UvrB/UvrC motif-containing protein | - |
| JNE42_RS00585 (JNE42_00585) | - | 107322..108413 (+) | 1092 | WP_024718295.1 | protein arginine kinase | - |
| JNE42_RS00590 (JNE42_00590) | clpC | 108410..110845 (+) | 2436 | WP_007496263.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| JNE42_RS00595 (JNE42_00595) | radA | 110939..112318 (+) | 1380 | WP_017359160.1 | DNA repair protein RadA | Machinery gene |
| JNE42_RS00600 (JNE42_00600) | disA | 112321..113400 (+) | 1080 | WP_007496267.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| JNE42_RS00605 (JNE42_00605) | - | 113554..114654 (+) | 1101 | WP_047946821.1 | PIN/TRAM domain-containing protein | - |
| JNE42_RS00610 (JNE42_00610) | ispD | 114668..115357 (+) | 690 | WP_008345432.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| JNE42_RS00615 (JNE42_00615) | ispF | 115360..115836 (+) | 477 | WP_007496273.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90025.76 Da Isoelectric Point: 6.2469
>NTDB_id=532298 JNE42_RS00590 WP_007496263.1 108410..110845(+) (clpC) [Bacillus altitudinis strain 63-2-2]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=532298 JNE42_RS00590 WP_007496263.1 108410..110845(+) (clpC) [Bacillus altitudinis strain 63-2-2]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATCGGAACAGAGCATATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TACACACCTAGAGCGAAGAAGGTTACGGAGCTTTCTATGGATGAAGCGAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTAGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCCAAT
ACACCAACTTTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTGATTGGCCGCAG
CAAAGAAATTCAGCGTGTCATTGAGGTCCTAAGTAGAAGAACAAAGAATAACCCTGTCTTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCGATCGCAGAAGGCCTCGCACAGCAAATTATTCACAACGAAGTGCCTGAAATTCTGCGTGATAAACGAGTC
ATGACACTTGATATGGGAACTGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAAGATCGTTTGAAAAAAGTCATGGA
CGAAATCCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAACTTCATACACTGATTGGTGCAGGTGGAGCAGAGGGTG
CGATTGATGCCTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAAGATGCTGCACTTGAACGTCGATTCCAGCCAATTCAAGTGGACCAGCCATCTGTTGATGA
AAGTATTCAAATTTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCCATTGAGG
CGGCGGTAAAGCTTTCTGATCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATTGACTTAATTGATGAGGCGGGT
TCAAAAGTTCGCTTACGTTCTTTCACAACACCGCCTAATCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCCGCTTCTCTTCGTGATACGGAGCAACGTTTGCGTGAAAAGG
TAGAAGTGACGAAGAAATCTTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTTTCTGTGGATGATATCGCAATGGTT
GTTTCTAGCTGGACGGGAGTACCTGTTTCAAAAATTGCTCAAACAGAAACAGATAAGCTTCTAAACATGGAACAATTGCT
CCACTCTCGCGTCATTGGACAGGATGAAGCAGTTGTTGCTGTTGCAAAAGCTGTAAGACGTGCCCGTGCTGGACTAAAAG
ATCCGAAACGTCCGATAGGCTCCTTTATTTTCTTAGGGCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCT
GAGTCTATCTTCGGTGATGAAGAAGCGATGATTCGTATTGATATGTCTGAGTACATGGAAAAACACTCGACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTGGGCTATGATGAGGGCGGTCAGCTGACTGAAAAAGTGAGAAGAAAGCCGTATTCTG
TCGTGCTTCTAGATGAGATTGAAAAGGCGCACCCTGATGTGTTTAACATCTTACTTCAAGTGTTAGAAGATGGTCGTCTC
ACTGATTCTAAAGGTCGTACTGTTGACTTTAGAAATACGATTTTGATTATGACTTCAAACGTTGGAGCTAGTGAGCTAAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGC
TGAAACGTGCGTTTAGACCGGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTGGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTGACAAAACGACTAAAAGAGCAGGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCCAAGATTGCCGACGAAGGTGTAGATCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TCGAGGATCGACTTTCTGAGGAATTGCTGAAAGGCAATATTGAAAAGGGCCAACATATCGTATTAGATGTAGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATCGGAACAGAGCATATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TACACACCTAGAGCGAAGAAGGTTACGGAGCTTTCTATGGATGAAGCGAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTAGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCCAAT
ACACCAACTTTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTGATTGGCCGCAG
CAAAGAAATTCAGCGTGTCATTGAGGTCCTAAGTAGAAGAACAAAGAATAACCCTGTCTTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCGATCGCAGAAGGCCTCGCACAGCAAATTATTCACAACGAAGTGCCTGAAATTCTGCGTGATAAACGAGTC
ATGACACTTGATATGGGAACTGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAAGATCGTTTGAAAAAAGTCATGGA
CGAAATCCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAACTTCATACACTGATTGGTGCAGGTGGAGCAGAGGGTG
CGATTGATGCCTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAAGATGCTGCACTTGAACGTCGATTCCAGCCAATTCAAGTGGACCAGCCATCTGTTGATGA
AAGTATTCAAATTTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCCATTGAGG
CGGCGGTAAAGCTTTCTGATCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATTGACTTAATTGATGAGGCGGGT
TCAAAAGTTCGCTTACGTTCTTTCACAACACCGCCTAATCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCCGCTTCTCTTCGTGATACGGAGCAACGTTTGCGTGAAAAGG
TAGAAGTGACGAAGAAATCTTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTTTCTGTGGATGATATCGCAATGGTT
GTTTCTAGCTGGACGGGAGTACCTGTTTCAAAAATTGCTCAAACAGAAACAGATAAGCTTCTAAACATGGAACAATTGCT
CCACTCTCGCGTCATTGGACAGGATGAAGCAGTTGTTGCTGTTGCAAAAGCTGTAAGACGTGCCCGTGCTGGACTAAAAG
ATCCGAAACGTCCGATAGGCTCCTTTATTTTCTTAGGGCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCT
GAGTCTATCTTCGGTGATGAAGAAGCGATGATTCGTATTGATATGTCTGAGTACATGGAAAAACACTCGACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTGGGCTATGATGAGGGCGGTCAGCTGACTGAAAAAGTGAGAAGAAAGCCGTATTCTG
TCGTGCTTCTAGATGAGATTGAAAAGGCGCACCCTGATGTGTTTAACATCTTACTTCAAGTGTTAGAAGATGGTCGTCTC
ACTGATTCTAAAGGTCGTACTGTTGACTTTAGAAATACGATTTTGATTATGACTTCAAACGTTGGAGCTAGTGAGCTAAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGC
TGAAACGTGCGTTTAGACCGGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTGGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTGACAAAACGACTAAAAGAGCAGGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCCAAGATTGCCGACGAAGGTGTAGATCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TCGAGGATCGACTTTCTGAGGAATTGCTGAAAGGCAATATTGAAAAGGGCCAACATATCGTATTAGATGTAGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.489 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.126 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.088 |
87.916 |
0.432 |
| clpE | Streptococcus mutans UA159 |
53.323 |
79.778 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.713 |
79.531 |
0.419 |