Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilL-C   Type   Machinery gene
Locus tag   LAJ61_RS06030 Genome accession   NZ_CP083409
Coordinates   1367739..1368101 (-) Length   120 a.a.
NCBI ID   WP_224053192.1    Uniprot ID   -
Organism   Moraxella osloensis strain FLMOS1     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1362739..1373101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LAJ61_RS05995 (LAJ61_05975) moaA 1363372..1364376 (+) 1005 WP_224053186.1 GTP 3',8-cyclase MoaA -
  LAJ61_RS06000 (LAJ61_05980) moaC 1364505..1365002 (+) 498 WP_224053187.1 cyclic pyranopterin monophosphate synthase MoaC -
  LAJ61_RS06005 (LAJ61_05985) moaD 1364989..1365252 (+) 264 WP_224053188.1 molybdopterin converting factor subunit 1 -
  LAJ61_RS06010 (LAJ61_05990) - 1365290..1365781 (+) 492 WP_224053189.1 molybdenum cofactor biosynthesis protein MoaE -
  LAJ61_RS06015 (LAJ61_05995) - 1365806..1366543 (+) 738 WP_224053190.1 sulfite exporter TauE/SafE family protein -
  LAJ61_RS06020 (LAJ61_06000) - 1366803..1367249 (-) 447 WP_224053191.1 chemotaxis protein CheX -
  LAJ61_RS06025 (LAJ61_06005) - 1367291..1367737 (-) 447 WP_135889520.1 chemotaxis protein CheX -
  LAJ61_RS06030 (LAJ61_06010) pilL-C 1367739..1368101 (-) 363 WP_224053192.1 response regulator Machinery gene
  LAJ61_RS06035 (LAJ61_06015) - 1368145..1370268 (-) 2124 WP_224053193.1 ATP-binding protein -
  LAJ61_RS06040 (LAJ61_06020) - 1370322..1371131 (-) 810 WP_224053194.1 transporter substrate-binding domain-containing protein -
  LAJ61_RS06045 (LAJ61_06025) - 1371333..1371887 (-) 555 WP_224054819.1 IS630 family transposase -
  LAJ61_RS06050 (LAJ61_06030) - 1371884..1372375 (-) 492 WP_224053195.1 winged helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 120 a.a.        Molecular weight: 13345.38 Da        Isoelectric Point: 4.0995

>NTDB_id=532101 LAJ61_RS06030 WP_224053192.1 1367739..1368101(-) (pilL-C) [Moraxella osloensis strain FLMOS1]
MYRLMIVDDSNIIRNRIQRLYNSDTFSLVATATNGDDAVEKFKLYKPEVITMDLTMPQMDGLECIEKLVELDPGVRILVV
SALSDKATGIKALELGASGFLCKPFSEEELVEALDELVSD

Nucleotide


Download         Length: 363 bp        

>NTDB_id=532101 LAJ61_RS06030 WP_224053192.1 1367739..1368101(-) (pilL-C) [Moraxella osloensis strain FLMOS1]
ATGTATCGCTTAATGATTGTCGATGATTCCAATATCATACGAAACCGCATTCAACGCCTTTACAACTCTGATACATTTTC
GTTGGTTGCTACGGCAACCAACGGCGATGATGCGGTAGAAAAATTCAAGCTATATAAACCAGAAGTTATCACTATGGATT
TGACTATGCCACAAATGGACGGGCTTGAATGTATAGAAAAGCTTGTTGAATTAGACCCTGGGGTAAGAATTCTTGTGGTG
TCTGCCCTATCAGATAAAGCAACTGGGATTAAAGCACTCGAATTAGGGGCGAGTGGGTTTTTATGTAAACCCTTCTCAGA
GGAAGAACTTGTTGAAGCGTTGGATGAATTGGTGAGTGACTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilL-C Synechocystis sp. PCC 6803

36.975

99.167

0.367