Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   LAJ61_RS05095 Genome accession   NZ_CP083409
Coordinates   1162753..1163076 (+) Length   107 a.a.
NCBI ID   WP_224054704.1    Uniprot ID   -
Organism   Moraxella osloensis strain FLMOS1     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1157753..1168076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LAJ61_RS05075 (LAJ61_05055) - 1158085..1159539 (-) 1455 WP_224054700.1 phosphomannomutase CpsG -
  LAJ61_RS05080 (LAJ61_05060) - 1159623..1160822 (-) 1200 WP_224054701.1 nucleotide sugar dehydrogenase -
  LAJ61_RS05085 (LAJ61_05065) mazG 1161150..1161974 (+) 825 WP_224054702.1 nucleoside triphosphate pyrophosphohydrolase -
  LAJ61_RS05090 (LAJ61_05070) - 1162281..1162550 (+) 270 WP_224054703.1 hypothetical protein -
  LAJ61_RS05095 (LAJ61_05075) comEA 1162753..1163076 (+) 324 WP_224054704.1 ComEA family DNA-binding protein Machinery gene
  LAJ61_RS05100 (LAJ61_05080) pcnB 1163315..1165564 (+) 2250 WP_224054705.1 polynucleotide adenylyltransferase PcnB -
  LAJ61_RS05105 (LAJ61_05085) folK 1165561..1166055 (+) 495 WP_224054706.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  LAJ61_RS05110 (LAJ61_05090) panB 1166261..1167142 (+) 882 WP_224054707.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -

Sequence

Protein


Download         Length: 107 a.a.        Molecular weight: 11277.84 Da        Isoelectric Point: 9.0986

>NTDB_id=532091 LAJ61_RS05095 WP_224054704.1 1162753..1163076(+) (comEA) [Moraxella osloensis strain FLMOS1]
MPAQAQVCTPTLTPEQAFLAVTNLTGTNGGSTKSSANDLANLPKVININTASEAELTQLDGIGAKKAQQIILYRQMIAPF
ATADDLANVKGIGKATVDKNRHRITTQ

Nucleotide


Download         Length: 324 bp        

>NTDB_id=532091 LAJ61_RS05095 WP_224054704.1 1162753..1163076(+) (comEA) [Moraxella osloensis strain FLMOS1]
ATGCCCGCACAGGCACAAGTATGTACCCCAACCTTGACGCCCGAGCAGGCTTTTTTGGCAGTGACAAATTTGACAGGGAC
TAACGGTGGTAGCACAAAATCCTCTGCAAATGACCTTGCCAATTTACCCAAAGTGATTAATATCAATACAGCCAGTGAAG
CCGAGCTCACACAGCTTGATGGTATCGGCGCCAAAAAAGCGCAGCAAATTATTTTATACCGGCAAATGATAGCGCCGTTT
GCCACAGCGGATGACCTAGCCAACGTCAAAGGTATCGGTAAAGCGACTGTCGATAAAAATCGCCACCGCATCACCACCCA
ATAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_3)

(45-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Vibrio campbellii strain DS40M4

44.828

81.308

0.364