Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE   Type   Machinery gene
Locus tag   LAJ61_RS01975 Genome accession   NZ_CP083409
Coordinates   459891..460457 (-) Length   188 a.a.
NCBI ID   WP_224054271.1    Uniprot ID   -
Organism   Moraxella osloensis strain FLMOS1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 454891..465457
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LAJ61_RS01955 (LAJ61_01945) - 455620..457419 (-) 1800 WP_224054267.1 PglL family O-oligosaccharyltransferase -
  LAJ61_RS01960 (LAJ61_01950) pilE 457886..458407 (+) 522 WP_224054268.1 pilin Machinery gene
  LAJ61_RS01965 (LAJ61_01955) tfpZ 458466..459200 (+) 735 WP_224054269.1 TfpX/TfpZ family type IV pilin accessory protein -
  LAJ61_RS01970 (LAJ61_01960) pilE 459445..459897 (-) 453 WP_409034978.1 type IV pilin protein Machinery gene
  LAJ61_RS01975 (LAJ61_01965) comE 459891..460457 (-) 567 WP_224054271.1 type IV pilin protein Machinery gene
  LAJ61_RS01980 (LAJ61_01970) - 460469..464374 (-) 3906 WP_224054272.1 pilus assembly protein PilY -
  LAJ61_RS01985 (LAJ61_01975) - 464445..465323 (-) 879 WP_224054273.1 PilX N-terminal domain-containing pilus assembly protein -

Sequence

Protein


Download         Length: 188 a.a.        Molecular weight: 20429.07 Da        Isoelectric Point: 8.4250

>NTDB_id=532078 LAJ61_RS01975 WP_224054271.1 459891..460457(-) (comE) [Moraxella osloensis strain FLMOS1]
MNRHKGFTLIELMVTVAMVAILASIAIPSYRQYAIRNAESQAQAKMKQLEIELNRWRATALTYKGFLPKKIANDGTVSYS
YDTGASDDVANTVIYVPANSTADNYQYKILLVDGDNTANSLVPTASSKLSNSLTAGRAWVMFATSNPTKFNDAHKILLTS
SGAQCKAKDSDSSVSIIPTSCDTNSESW

Nucleotide


Download         Length: 567 bp        

>NTDB_id=532078 LAJ61_RS01975 WP_224054271.1 459891..460457(-) (comE) [Moraxella osloensis strain FLMOS1]
ATGAATCGTCACAAGGGCTTTACGCTGATTGAACTGATGGTAACGGTAGCGATGGTTGCGATACTCGCCAGTATCGCTAT
CCCATCGTATCGGCAATATGCTATCCGCAATGCCGAATCGCAAGCGCAAGCCAAAATGAAGCAGCTAGAGATTGAGCTCA
ATCGCTGGCGGGCGACTGCACTGACCTATAAAGGCTTTTTACCCAAAAAAATTGCCAATGACGGTACGGTCAGTTACAGT
TATGATACTGGCGCAAGCGATGATGTGGCAAATACGGTGATTTATGTGCCCGCTAACAGCACAGCAGATAATTATCAATA
CAAGATACTATTGGTGGATGGCGACAATACTGCCAATAGTCTAGTGCCAACGGCATCTTCGAAACTCTCTAATAGCTTGA
CTGCAGGTAGAGCATGGGTGATGTTTGCTACCTCTAATCCCACAAAATTTAACGATGCGCATAAGATTTTGCTCACTAGC
AGTGGGGCACAATGCAAAGCCAAAGATAGTGACAGTAGCGTTAGTATCATACCAACCAGCTGTGATACTAATTCGGAGTC
ATGGTAA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(1-26)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE Acinetobacter baylyi ADP1

35.938

100

0.367