Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | C248_RS07905 | Genome accession | NC_018608 |
| Coordinates | 1624932..1625231 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus 08BA02176 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1619932..1630231
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C248_RS07880 (C248_1578) | gcvPA | 1621144..1622490 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| C248_RS07885 (C248_1579) | gcvT | 1622510..1623601 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| C248_RS07890 (C248_1580) | - | 1623760..1624284 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| C248_RS07895 (C248_1581) | - | 1624274..1624420 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| C248_RS07900 (C248_1582) | comGF | 1624517..1625014 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| C248_RS07905 (C248_1583) | comGE | 1624932..1625231 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| C248_RS07910 (C248_1584) | comGD | 1625218..1625664 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C248_RS07915 (C248_1585) | comGC | 1625642..1625944 (-) | 303 | WP_029657948.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| C248_RS07920 (C248_1586) | comGB | 1625966..1627036 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| C248_RS07925 (C248_1587) | comGA | 1627008..1627982 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| C248_RS07930 (C248_1588) | - | 1628034..1628657 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| C248_RS07935 (C248_1589) | - | 1628654..1628983 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| C248_RS07940 (C248_1590) | - | 1628983..1629969 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| C248_RS07945 (C248_1591) | - | 1629966..1630169 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=53207 C248_RS07905 WP_000844413.1 1624932..1625231(-) (comGE) [Staphylococcus aureus 08BA02176]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=53207 C248_RS07905 WP_000844413.1 1624932..1625231(-) (comGE) [Staphylococcus aureus 08BA02176]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |