Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   JNE45_RS08795 Genome accession   NZ_CP069061
Coordinates   1751017..1751397 (+) Length   126 a.a.
NCBI ID   WP_044335941.1    Uniprot ID   A0AAP7UKB4
Organism   Bacillus safensis strain F6     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1746017..1756397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE45_RS08785 (JNE45_08785) - 1746541..1749684 (+) 3144 WP_203129867.1 bifunctional cytochrome P450/NADPH--P450 reductase -
  JNE45_RS08790 (JNE45_08790) - 1749879..1750787 (+) 909 WP_048240225.1 trypsin-like serine peptidase -
  JNE45_RS08795 (JNE45_08795) nucA/comI 1751017..1751397 (+) 381 WP_044335941.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  JNE45_RS08800 (JNE45_08800) - 1751544..1752392 (+) 849 WP_203129868.1 STAS domain-containing protein -
  JNE45_RS08805 (JNE45_08805) - 1752424..1752966 (-) 543 WP_203129869.1 IseA DL-endopeptidase inhibitor family protein -
  JNE45_RS08810 (JNE45_08810) - 1753263..1753712 (+) 450 WP_203129870.1 hypothetical protein -
  JNE45_RS08815 (JNE45_08815) lexA 1753760..1754380 (-) 621 WP_034283422.1 transcriptional repressor LexA -
  JNE45_RS08820 (JNE45_08820) yneA 1754540..1754851 (+) 312 WP_203129871.1 cell division suppressor protein YneA -
  JNE45_RS08825 (JNE45_08825) - 1754869..1755516 (+) 648 WP_203129872.1 YneB family resolvase-like protein -
  JNE45_RS08830 (JNE45_08830) - 1755586..1755816 (+) 231 WP_048240230.1 DUF896 domain-containing protein -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13727.41 Da        Isoelectric Point: 8.5068

>NTDB_id=532048 JNE45_RS08795 WP_044335941.1 1751017..1751397(+) (nucA/comI) [Bacillus safensis strain F6]
MGTLLGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=532048 JNE45_RS08795 WP_044335941.1 1751017..1751397(+) (nucA/comI) [Bacillus safensis strain F6]
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAAAGGTGCTGATCGATATGATCATGTCGTTCAATTTCC
AAAGGAACGATACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCG
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTTCAATATGTCAGTCCATCTGATAATAGGGGAGCAGGCTCATG
GGTCGGCCATCAAATCAGTGGGTTTCCTGATGGAAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548