Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JNE45_RS06895 Genome accession   NZ_CP069061
Coordinates   1369120..1369692 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus safensis strain F6     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1364120..1374692
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE45_RS06865 (JNE45_06865) dapD 1364235..1364945 (+) 711 WP_095408367.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  JNE45_RS06870 (JNE45_06870) - 1364980..1366158 (+) 1179 WP_197197802.1 N-acetyldiaminopimelate deacetylase -
  JNE45_RS06875 (JNE45_06875) - 1366209..1366451 (+) 243 WP_024424725.1 YkuS family protein -
  JNE45_RS06880 (JNE45_06880) - 1366474..1367283 (-) 810 WP_203129744.1 mechanosensitive ion channel family protein -
  JNE45_RS06885 (JNE45_06885) ahpA 1367556..1368098 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  JNE45_RS06890 (JNE45_06890) - 1368181..1368639 (+) 459 WP_024424727.1 TlpA family protein disulfide reductase -
  JNE45_RS06895 (JNE45_06895) rok 1369120..1369692 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  JNE45_RS06900 (JNE45_06900) - 1369739..1370656 (-) 918 WP_203129745.1 sigmaE regulated sporulation protein -
  JNE45_RS06905 (JNE45_06905) - 1370742..1371323 (+) 582 WP_203129746.1 molybdenum cofactor guanylyltransferase -
  JNE45_RS06910 (JNE45_06910) - 1371353..1372369 (+) 1017 WP_203129747.1 thiazole biosynthesis adenylyltransferase ThiF -
  JNE45_RS06915 (JNE45_06915) glp 1372382..1373656 (+) 1275 WP_203129748.1 gephyrin-like molybdotransferase Glp -
  JNE45_RS06920 (JNE45_06920) mobB 1373638..1374162 (+) 525 WP_203129749.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  JNE45_RS06925 (JNE45_06925) - 1374159..1374650 (+) 492 WP_203129750.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=532042 JNE45_RS06895 WP_024426871.1 1369120..1369692(+) (rok) [Bacillus safensis strain F6]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=532042 JNE45_RS06895 WP_024426871.1 1369120..1369692(+) (rok) [Bacillus safensis strain F6]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCTTCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCCCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGTTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGATATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8