Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | JNE45_RS06610 | Genome accession | NZ_CP069061 |
| Coordinates | 1314030..1316132 (-) | Length | 700 a.a. |
| NCBI ID | WP_203129725.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain F6 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1309030..1321132
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNE45_RS06585 (JNE45_06585) | - | 1309415..1309657 (+) | 243 | WP_034322108.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| JNE45_RS06590 (JNE45_06590) | - | 1309704..1311209 (-) | 1506 | WP_197197785.1 | ATP-binding protein | - |
| JNE45_RS06595 (JNE45_06595) | - | 1311415..1311870 (+) | 456 | WP_034281539.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| JNE45_RS06600 (JNE45_06600) | motB | 1312099..1312866 (-) | 768 | WP_111291312.1 | flagellar motor protein MotB | - |
| JNE45_RS06605 (JNE45_06605) | motA | 1312859..1313653 (-) | 795 | WP_111291313.1 | flagellar motor stator protein MotA | - |
| JNE45_RS06610 (JNE45_06610) | clpC | 1314030..1316132 (-) | 2103 | WP_203129725.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| JNE45_RS06615 (JNE45_06615) | - | 1316377..1317420 (+) | 1044 | WP_095408337.1 | hypothetical protein | - |
| JNE45_RS06620 (JNE45_06620) | queC | 1317697..1318353 (+) | 657 | WP_024424683.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| JNE45_RS06625 (JNE45_06625) | queD | 1318354..1318794 (+) | 441 | WP_095408338.1 | 6-carboxytetrahydropterin synthase QueD | - |
| JNE45_RS06630 (JNE45_06630) | queE | 1318787..1319518 (+) | 732 | WP_203129726.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| JNE45_RS06635 (JNE45_06635) | queF | 1319534..1320031 (+) | 498 | WP_003211403.1 | preQ(1) synthase | - |
| JNE45_RS06640 (JNE45_06640) | - | 1320292..1320510 (+) | 219 | WP_070325762.1 | hypothetical protein | - |
| JNE45_RS06645 (JNE45_06645) | - | 1320635..1320823 (-) | 189 | WP_003211747.1 | YkvS family protein | - |
Sequence
Protein
Download Length: 700 a.a. Molecular weight: 77908.48 Da Isoelectric Point: 5.0720
>NTDB_id=532040 JNE45_RS06610 WP_203129725.1 1314030..1316132(-) (clpC) [Bacillus safensis strain F6]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQPAGHAPNGEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIETRLQNKTTDKEHIVTAEDIQTIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQEEAIEEQSLIDLLSSYFKPEFLNRFDSIIQFDSLDRNDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQPAGHAPNGEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIETRLQNKTTDKEHIVTAEDIQTIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQEEAIEEQSLIDLLSSYFKPEFLNRFDSIIQFDSLDRNDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
Nucleotide
Download Length: 2103 bp
>NTDB_id=532040 JNE45_RS06610 WP_203129725.1 1314030..1316132(-) (clpC) [Bacillus safensis strain F6]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTGAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTACACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTGTTTGGAGGAAGTTCAT
TTTTCTCTCAGCCAGCAGGACATGCCCCAAACGGGGAGCAGCCAAAACAAAAAGGCTTACTTGATGAGCTTGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAATCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TGAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGCTCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAACTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTCATCGTAGATGAGCCAACACAAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAGGCCTATCATGGTGTCACCTATTCAGATGAAGCAATCAAAGCGTGCGTTCAATTATCTTCGCGGTATATTCAAG
ACCGTCATTTACCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAACCGATTAGCGCAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAACAAGACTTCAAAACAAAACAACTGACAAAGAACATATCGTCACAG
CAGAGGACATTCAGACCATTGTGGAACAAAAAACAGGCATTCCTGTCGGTAAACTGCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGACGTCCGTCTAAAAGCACGAGTGATTGGGCAGGAGCATGCGGTTGATAAAGTGGCCAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATCTTCCTTCAAA
TCATGGAAGATGGCCGCTTAACAGACAGCCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATTATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAAGAAGAAGCGATTGAGGAACAATCACTCATTGA
TTTACTCAGCAGCTACTTCAAACCAGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGATTCATTAGACAGAAATG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGGAGAACCATCCAAGA
GCACGTTGAAGATCAAATGACGGAGATCTTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTGAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTACACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTGTTTGGAGGAAGTTCAT
TTTTCTCTCAGCCAGCAGGACATGCCCCAAACGGGGAGCAGCCAAAACAAAAAGGCTTACTTGATGAGCTTGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAATCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TGAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGCTCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAACTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTCATCGTAGATGAGCCAACACAAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAGGCCTATCATGGTGTCACCTATTCAGATGAAGCAATCAAAGCGTGCGTTCAATTATCTTCGCGGTATATTCAAG
ACCGTCATTTACCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAACCGATTAGCGCAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAACAAGACTTCAAAACAAAACAACTGACAAAGAACATATCGTCACAG
CAGAGGACATTCAGACCATTGTGGAACAAAAAACAGGCATTCCTGTCGGTAAACTGCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGACGTCCGTCTAAAAGCACGAGTGATTGGGCAGGAGCATGCGGTTGATAAAGTGGCCAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATCTTCCTTCAAA
TCATGGAAGATGGCCGCTTAACAGACAGCCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATTATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAAGAAGAAGCGATTGAGGAACAATCACTCATTGA
TTTACTCAGCAGCTACTTCAAACCAGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGATTCATTAGACAGAAATG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGGAGAACCATCCAAGA
GCACGTTGAAGATCAAATGACGGAGATCTTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.64 |
100 |
0.597 |
| clpE | Streptococcus mutans UA159 |
56.199 |
100 |
0.596 |
| clpE | Streptococcus pneumoniae Rx1 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae D39 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae R6 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.387 |
100 |
0.573 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
54.03 |
95.714 |
0.517 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.077 |
92.857 |
0.437 |
| clpC | Streptococcus thermophilus LMD-9 |
46.285 |
92.286 |
0.427 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.975 |
92.286 |
0.424 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.795 |
90.571 |
0.406 |
| clpC | Streptococcus pneumoniae Rx1 |
44.992 |
89.857 |
0.404 |
| clpC | Streptococcus pneumoniae D39 |
44.992 |
89.857 |
0.404 |
| clpC | Streptococcus mutans UA159 |
44.603 |
90 |
0.401 |