Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IPZ53_RS05595 Genome accession   NZ_CP068989
Coordinates   1093219..1093410 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain WSM-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1088219..1098410
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IPZ53_RS05565 (IPZ53_05565) argF 1089073..1090044 (+) 972 WP_032874446.1 ornithine carbamoyltransferase -
  IPZ53_RS05570 (IPZ53_05570) - 1090120..1090299 (+) 180 WP_003155070.1 YjzC family protein -
  IPZ53_RS05575 (IPZ53_05575) - 1090336..1090521 (-) 186 WP_032874447.1 YjzD family protein -
  IPZ53_RS05580 (IPZ53_05580) - 1090780..1091514 (+) 735 WP_032874448.1 hypothetical protein -
  IPZ53_RS05585 (IPZ53_05585) - 1091597..1092163 (+) 567 WP_032874449.1 hypothetical protein -
  IPZ53_RS05590 (IPZ53_05590) med 1092253..1093206 (+) 954 WP_007610578.1 BMP family ABC transporter substrate-binding protein Regulator
  IPZ53_RS05595 (IPZ53_05595) comZ 1093219..1093410 (+) 192 WP_003155061.1 ComZ family protein Regulator
  IPZ53_RS05600 (IPZ53_05600) - 1093439..1093657 (-) 219 WP_032874450.1 hypothetical protein -
  IPZ53_RS05605 (IPZ53_05605) - 1093825..1094763 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  IPZ53_RS05610 (IPZ53_05610) fabF 1094786..1096024 (+) 1239 WP_032874451.1 beta-ketoacyl-ACP synthase II -
  IPZ53_RS05615 (IPZ53_05615) - 1096107..1096892 (+) 786 WP_029325951.1 DUF2268 domain-containing protein -
  IPZ53_RS05620 (IPZ53_05620) - 1097066..1098052 (+) 987 WP_029325950.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=531901 IPZ53_RS05595 WP_003155061.1 1093219..1093410(+) (comZ) [Bacillus velezensis strain WSM-1]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=531901 IPZ53_RS05595 WP_003155061.1 1093219..1093410(+) (comZ) [Bacillus velezensis strain WSM-1]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCAATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794