Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   DI291_RS08085 Genome accession   NZ_CP068988
Coordinates   1595456..1596043 (+) Length   195 a.a.
NCBI ID   WP_020451209.1    Uniprot ID   A0A6I7TW81
Organism   Bacillus paralicheniformis strain SUBG0010     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1590456..1601043
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DI291_RS08055 (DI291_08280) - 1590752..1591204 (+) 453 WP_095290382.1 flavodoxin -
  DI291_RS08060 (DI291_08285) dapD 1591311..1592021 (+) 711 WP_020451205.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  DI291_RS08065 (DI291_08290) - 1592091..1593215 (+) 1125 WP_128822354.1 N-acetyldiaminopimelate deacetylase -
  DI291_RS08070 (DI291_08295) - 1593278..1593523 (+) 246 WP_003181323.1 YkuS family protein -
  DI291_RS08075 (DI291_08300) ahpA 1593819..1594361 (+) 543 WP_020451207.1 biofilm-specific peroxidase AhpA -
  DI291_RS08080 (DI291_08305) - 1594451..1594909 (+) 459 WP_128822356.1 redoxin domain-containing protein -
  DI291_RS08085 (DI291_08310) rok 1595456..1596043 (+) 588 WP_020451209.1 transcriptional regulator Rok Regulator
  DI291_RS08090 (DI291_08315) - 1596188..1597144 (-) 957 WP_023857286.1 sporulation protein -
  DI291_RS08095 (DI291_08320) - 1597297..1597884 (+) 588 WP_023857285.1 molybdenum cofactor guanylyltransferase -
  DI291_RS08100 (DI291_08325) - 1597990..1599003 (+) 1014 WP_128822358.1 molybdopterin-synthase adenylyltransferase MoeB -
  DI291_RS08105 (DI291_08330) glp 1599022..1600314 (+) 1293 WP_128822360.1 gephyrin-like molybdotransferase Glp -
  DI291_RS08110 (DI291_08335) mobB 1600281..1600808 (+) 528 WP_128822362.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 195 a.a.        Molecular weight: 22537.49 Da        Isoelectric Point: 9.9960

>NTDB_id=531837 DI291_RS08085 WP_020451209.1 1595456..1596043(+) (rok) [Bacillus paralicheniformis strain SUBG0010]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
QQPQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 588 bp        

>NTDB_id=531837 DI291_RS08085 WP_020451209.1 1595456..1596043(+) (rok) [Bacillus paralicheniformis strain SUBG0010]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTGGAGCAGCTGAATGAGGCTGAGGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAATATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACGGAATCTCTCCCTGTTTTAGCTGAATTAGCTGCGCAGGAGATGAAGAGCTATCAGCAACAACAG
CAGCAGCCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGATGG
AACGACAAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAACTGCGTGAAGCGGCGATTAAAACATTAA
AACGCCATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAATATG
ACAACCTTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGGTGA
GATTTCTACCGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TW81

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.684

97.436

0.815