Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   DI291_RS07980 Genome accession   NZ_CP068988
Coordinates   1579370..1579831 (-) Length   153 a.a.
NCBI ID   WP_020451191.1    Uniprot ID   A0A6I7TMU9
Organism   Bacillus paralicheniformis strain SUBG0010     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1574370..1584831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DI291_RS07955 (DI291_08185) - 1574720..1575889 (-) 1170 WP_128822348.1 aminotransferase A -
  DI291_RS07960 - 1576081..1576239 (-) 159 WP_165583461.1 hypothetical protein -
  DI291_RS07965 (DI291_08190) - 1576411..1576935 (+) 525 WP_020451188.1 RDD family protein -
  DI291_RS07970 (DI291_08195) - 1577031..1578350 (+) 1320 WP_095290369.1 MFS transporter -
  DI291_RS07975 (DI291_08200) - 1578424..1579341 (+) 918 WP_020451190.1 chemotaxis protein -
  DI291_RS07980 (DI291_08205) kre 1579370..1579831 (-) 462 WP_020451191.1 YkyB family protein Regulator
  DI291_RS07985 (DI291_08210) - 1579973..1581274 (-) 1302 WP_128822350.1 MFS transporter -
  DI291_RS07990 (DI291_08215) - 1581363..1581860 (-) 498 WP_020451193.1 L,D-transpeptidase family protein -
  DI291_RS07995 (DI291_08220) - 1582038..1582895 (-) 858 WP_023857290.1 metallophosphoesterase -
  DI291_RS08000 (DI291_08225) fadH 1583042..1583806 (+) 765 WP_075753081.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17573.37 Da        Isoelectric Point: 10.6730

>NTDB_id=531836 DI291_RS07980 WP_020451191.1 1579370..1579831(-) (kre) [Bacillus paralicheniformis strain SUBG0010]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFASLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=531836 DI291_RS07980 WP_020451191.1 1579370..1579831(-) (kre) [Bacillus paralicheniformis strain SUBG0010]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTGAATCGCCA
TGCAAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAGG
GTAAAAAGGTAGGCCTTCACTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAGCCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATTAAGGAAAAACCGCTCGTCA
CAAACCGGAAGCGCCCTGCCTCAAAGCCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TMU9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83