Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JN403_RS05925 Genome accession   NZ_CP068986
Coordinates   1335316..1335726 (+) Length   136 a.a.
NCBI ID   WP_065991170.1    Uniprot ID   -
Organism   Pseudomonas sp. 15A4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1330316..1340726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JN403_RS05900 (JN403_05900) pyrR 1331332..1331853 (-) 522 WP_122536402.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  JN403_RS05905 (JN403_05905) ruvX 1331930..1332367 (-) 438 WP_205486098.1 Holliday junction resolvase RuvX -
  JN403_RS05910 (JN403_05910) - 1332367..1332936 (-) 570 WP_122536404.1 YqgE/AlgH family protein -
  JN403_RS05915 (JN403_05915) - 1333044..1333946 (-) 903 WP_205486101.1 energy transducer TonB -
  JN403_RS05920 (JN403_05920) gshB 1334119..1335074 (-) 956 Protein_1162 glutathione synthase -
  JN403_RS05925 (JN403_05925) pilG 1335316..1335726 (+) 411 WP_065991170.1 twitching motility response regulator PilG Regulator
  JN403_RS05930 (JN403_05930) pilH 1335772..1336137 (+) 366 WP_065991171.1 twitching motility response regulator PilH -
  JN403_RS05935 (JN403_05935) - 1336154..1336692 (+) 539 Protein_1165 chemotaxis protein CheW -
  JN403_RS05940 (JN403_05940) - 1336768..1338804 (+) 2037 WP_122536408.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15072.58 Da        Isoelectric Point: 8.5290

>NTDB_id=531798 JN403_RS05925 WP_065991170.1 1335316..1335726(+) (pilG) [Pseudomonas sp. 15A4]
MEQHSAPLKVMVIDDSRTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAVEQQLS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=531798 JN403_RS05925 WP_065991170.1 1335316..1335726(+) (pilG) [Pseudomonas sp. 15A4]
ATGGAACAGCATTCAGCCCCATTGAAAGTGATGGTCATCGACGACTCCCGGACGATTCGTCGCACCGCCGAGACGCTGCT
GAAAAACGTCGGCTGTGAAGTGATCACCGCCATCGACGGCTTCGACGCACTGGCCAAGATTGCCGACAATCATCCCAGAA
TCATTTTCGTCGACATCATGATGCCCAGGCTCGACGGGTATCAGACGTGCGCGTTGATCAAGAACAACCGGGCCTTCAAA
TCCACGCCGGTGATCATGTTGTCCTCAAGGGACGGGCTCTTCGACAAGGCCAAGGGGCGCATCGTCGGTTCCGATCAGTT
TTTGACCAAACCGTTCAGCAAGGAAGAACTGCTCAGTGCGATCAAGGCCCATGTGCCCGGGTTCGTTGCAGTCGAACAAC
AACTATCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.6

91.912

0.676