Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JNE32_RS07600 Genome accession   NZ_CP068982
Coordinates   1446887..1447462 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain pb2441     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1441887..1452462
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE32_RS07570 (JNE32_07525) dapD 1442074..1442784 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  JNE32_RS07575 (JNE32_07530) dapI 1442854..1443978 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  JNE32_RS07580 (JNE32_07535) ykuS 1444040..1444285 (+) 246 WP_003232382.1 YkuS family protein -
  JNE32_RS07585 (JNE32_07540) mscT 1444322..1445125 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  JNE32_RS07590 (JNE32_07545) ahpA 1445362..1445904 (+) 543 WP_038427629.1 biofilm-specific peroxidase AhpA -
  JNE32_RS07595 (JNE32_07550) ykuV 1445975..1446421 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  JNE32_RS07600 (JNE32_07555) rok 1446887..1447462 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  JNE32_RS07605 (JNE32_07560) cse15 1447503..1448468 (-) 966 WP_038427630.1 spore protein Cse15 -
  JNE32_RS07610 (JNE32_07565) mobA 1448605..1449204 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  JNE32_RS07615 (JNE32_07570) moeB 1449255..1450274 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  JNE32_RS07620 (JNE32_07575) glp 1450292..1451584 (+) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  JNE32_RS07625 (JNE32_07580) mobB 1451545..1452066 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=531724 JNE32_RS07600 WP_003232378.1 1446887..1447462(+) (rok) [Bacillus subtilis strain pb2441]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=531724 JNE32_RS07600 WP_003232378.1 1446887..1447462(+) (rok) [Bacillus subtilis strain pb2441]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1