Detailed information NTG0531605

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K9U36_RS20600
• Genome accession: NZ_CP083273
• Coordinates: 4248315..4249298 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain BL21-RIPL
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4243315..4254298

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K9U36_RS20585 (K9U36_20535)	dppA	4244458..4246065 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
K9U36_RS20590 (K9U36_20540)	dppB	4246373..4247392 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K9U36_RS20595 (K9U36_20545)	dppC	4247402..4248304 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K9U36_RS20600 (K9U36_20550)	amiE	4248315..4249298 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
K9U36_RS20605 (K9U36_20555)	dppF	4249295..4250299 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K9U36_RS20610 (K9U36_20560)	yhjV	4250329..4251600 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
K9U36_RS20615 (K9U36_20565)	-	4251981..4252217 (-)	237	Protein_4075	DeoR family transcriptional regulator	-
K9U36_RS20620 (K9U36_20570)	gatD	4252323..4253363 (-)	1041	WP_000844219.1	galactitol-1-phosphate 5-dehydrogenase	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=531605 K9U36_RS20600 WP_001196486.1 4248315..4249298(+) (amiE) [Escherichia coli strain BL21-RIPL]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=531605 K9U36_RS20600 WP_001196486.1 4248315..4249298(+) (amiE) [Escherichia coli strain BL21-RIPL]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404