Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | P795_RS03015 | Genome accession | NC_023028 |
| Coordinates | 626579..627094 (-) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii ZW85-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 621579..632094
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P795_RS02990 (P795_2915) | - | 622125..623768 (+) | 1644 | WP_000281766.1 | nitrite/sulfite reductase | - |
| P795_RS02995 (P795_2920) | - | 623761..624246 (+) | 486 | WP_000935247.1 | DUF934 domain-containing protein | - |
| P795_RS03000 (P795_2925) | - | 624329..624682 (+) | 354 | WP_000457783.1 | multidrug efflux SMR transporter | - |
| P795_RS03005 (P795_2930) | - | 624725..625168 (-) | 444 | WP_001176583.1 | VOC family protein | - |
| P795_RS03010 (P795_2935) | - | 625295..626470 (-) | 1176 | WP_000129968.1 | thiolase family protein | - |
| P795_RS03015 (P795_2940) | fimT | 626579..627094 (-) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| P795_RS03020 (P795_2945) | omp38 | 627476..628546 (+) | 1071 | WP_002046685.1 | outer membrane protein Omp38 | - |
| P795_RS19100 (P795_2950) | - | 628671..628829 (-) | 159 | WP_000692859.1 | hypothetical protein | - |
| P795_RS03030 (P795_2955) | - | 628833..630038 (-) | 1206 | WP_023896239.1 | RtcB family protein | - |
| P795_RS03035 | - | 630316..631718 (-) | 1403 | Protein_581 | amino acid permease | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=53135 P795_RS03015 WP_000477151.1 626579..627094(-) (fimT) [Acinetobacter baumannii ZW85-1]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=53135 P795_RS03015 WP_000477151.1 626579..627094(-) (fimT) [Acinetobacter baumannii ZW85-1]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGCTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGCTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |