Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   K3A98_RS04860 Genome accession   NZ_CP083259
Coordinates   956252..957070 (+) Length   272 a.a.
NCBI ID   WP_001124427.1    Uniprot ID   -
Organism   Staphylococcus aureus strain HL25274     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 951252..962070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K3A98_RS04835 (K3A98_000959) - 951866..952396 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  K3A98_RS04840 (K3A98_000960) yfkAB 952659..953810 (-) 1152 WP_001089609.1 radical SAM/CxCxxxxC motif protein YfkAB -
  K3A98_RS04845 (K3A98_000961) - 954034..954195 (+) 162 WP_001005407.1 SE1561 family protein -
  K3A98_RS04850 (K3A98_000962) - 954325..954840 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  K3A98_RS04855 (K3A98_000963) sgtB 955182..955991 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  K3A98_RS04860 (K3A98_000964) recX 956252..957070 (+) 819 WP_001124427.1 recombination regulator RecX Regulator
  K3A98_RS04865 (K3A98_000965) - 957048..957362 (+) 315 WP_000435806.1 YfhH family protein -
  K3A98_RS04870 (K3A98_000966) - 957377..958894 (+) 1518 WP_031875054.1 ABC transporter ATP-binding protein -
  K3A98_RS04875 (K3A98_000967) - 958903..959739 (+) 837 WP_000886472.1 hypothetical protein -
  K3A98_RS04880 (K3A98_000968) - 960000..960977 (-) 978 WP_000379095.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=531289 K3A98_RS04860 WP_001124427.1 956252..957070(+) (recX) [Staphylococcus aureus strain HL25274]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
LQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=531289 K3A98_RS04860 WP_001124427.1 956252..957070(+) (recX) [Staphylococcus aureus strain HL25274]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGAATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
TTACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993