Detailed information NTG0531135

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: K8Z53_RS00515
• Genome accession: NZ_CP083238
• Coordinates: 89687..90793 (-)
• Length: 368 a.a.
• NCBI ID: WP_009328417.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain 2709
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 84687..95793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8Z53_RS00485 (K8Z53_00475)	-	86677..87765 (+)	1089	WP_142782681.1	N-acetylmuramoyl-L-alanine amidase	-
K8Z53_RS00490 (K8Z53_00480)	-	87897..88283 (+)	387	WP_021837858.1	hypothetical protein	-
K8Z53_RS00495 (K8Z53_00485)	-	88302..88556 (+)	255	WP_009328416.1	phage holin	-
K8Z53_RS00500 (K8Z53_00490)	-	88575..88874 (+)	300	WP_034291560.1	hypothetical protein	-
K8Z53_RS00505	-	89109..89159 (+)	51	WP_228767678.1	hypothetical protein	-
K8Z53_RS00510	-	89562..89690 (-)	129	WP_256692922.1	hypothetical protein	-
K8Z53_RS00515 (K8Z53_00500)	rapC	89687..90793 (-)	1107	WP_009328417.1	tetratricopeptide repeat protein	Regulator
K8Z53_RS00520 (K8Z53_00505)	-	90904..92163 (-)	1260	WP_009328418.1	MFS transporter	-
K8Z53_RS00525 (K8Z53_00510)	-	92305..92658 (-)	354	WP_009328419.1	hypothetical protein	-
K8Z53_RS00530 (K8Z53_00515)	rok	92728..93210 (-)	483	WP_009328420.1	hypothetical protein	Regulator
K8Z53_RS00535 (K8Z53_00520)	-	93496..93954 (-)	459	WP_009328421.1	SMI1/KNR4 family protein	-
K8Z53_RS00540 (K8Z53_00525)	-	93995..94417 (-)	423	WP_009328422.1	SMI1/KNR4 family protein	-
K8Z53_RS00545 (K8Z53_00530)	-	94432..94719 (-)	288	WP_142782682.1	HNH/ENDO VII family nuclease	-
K8Z53_RS00550 (K8Z53_00535)	-	94823..95302 (-)	480	WP_075646820.1	antitoxin YezG family protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 43739.88 Da
• Isoelectric Point: 5.0023

>NTDB_id=531135 K8Z53_RS00515 WP_009328417.1 89687..90793(-) (rapC) [Bacillus licheniformis strain 2709]
MTTTEIAYEEVANKINQWYTMIKKREIEDAIKLKDEIDCLLDDMEENQNLLLYYNLLDARHKMSVDMFKSSGEILEKIRK
SPEMQKTDDMLQYYFLFFSGQYMFFKKKYIDAINYYKLAEDKLVKIEDEIEKAEFYYHLAISYYYIDQYFFSLAYAEKAL
TIFREFEDYAHRSISSEMILGANKLDLFHYESAYEHYSHALKFAKAKQIPESEGKAYHNLGILYIRRNMLSEAKDCFKNA
LQLQDYIQSINGLKSIYNLTHVLYKSGQIEEAREWYDKGLKRAEKEGDKEYLAKLTLVNTLYDEYNESVLTNSLDILEKL
DLWNDVAELTLEVGCYYKKSDDIKNAAKYLEKCIHARDQILKVTEELK

Nucleotide

• Length: 1107 bp

>NTDB_id=531135 K8Z53_RS00515 WP_009328417.1 89687..90793(-) (rapC) [Bacillus licheniformis strain 2709]
TTGACAACGACTGAAATTGCATATGAAGAAGTAGCCAATAAGATTAACCAGTGGTATACGATGATTAAAAAGCGTGAAAT
TGAAGATGCCATAAAGTTGAAAGATGAAATTGATTGCTTGTTGGATGATATGGAGGAGAATCAAAATTTGCTCCTTTATT
ACAATCTCTTAGATGCGCGTCACAAGATGTCGGTAGACATGTTTAAGTCGTCAGGGGAAATCCTTGAGAAGATTCGGAAA
AGTCCTGAAATGCAGAAAACGGATGATATGCTCCAATATTATTTTTTGTTTTTCTCTGGTCAATATATGTTTTTCAAAAA
GAAGTACATAGATGCAATTAATTATTACAAATTAGCTGAAGATAAGCTGGTTAAAATTGAAGATGAAATTGAAAAAGCGG
AATTTTATTATCATTTAGCCATATCATATTATTACATTGATCAATATTTCTTCTCATTAGCTTATGCTGAAAAAGCTCTA
ACTATCTTCAGGGAATTTGAAGACTATGCACATAGATCAATTAGCAGTGAAATGATCTTGGGTGCAAATAAACTTGATTT
ATTCCATTATGAATCGGCTTATGAGCATTACAGCCATGCCTTAAAATTTGCAAAGGCTAAGCAGATTCCTGAGTCTGAAG
GAAAGGCATATCATAATCTTGGGATACTCTATATAAGAAGAAACATGCTATCTGAAGCAAAAGACTGTTTTAAAAATGCT
TTGCAGCTTCAAGATTATATCCAAAGCATAAATGGACTTAAATCAATCTATAACCTTACTCATGTCTTGTATAAATCGGG
ACAGATTGAAGAAGCAAGGGAATGGTATGACAAAGGATTGAAACGTGCAGAAAAAGAAGGAGATAAGGAATATTTGGCGA
AACTTACACTTGTTAACACCTTATACGATGAGTACAATGAAAGTGTGTTAACGAATTCCCTTGACATTTTAGAAAAGTTG
GATTTATGGAATGATGTAGCAGAATTGACACTAGAAGTGGGGTGCTACTACAAAAAATCCGATGATATCAAGAATGCAGC
AAAATATCTTGAAAAATGTATTCACGCAAGGGATCAAATTCTAAAAGTGACGGAGGAATTAAAATGA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (333-354)

• MalT-like TPR region (TPR_MalT) (153-285)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	35.544	100	0.364