Detailed information NTG0530767

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: JM957_RS25935
• Genome accession: NZ_CP068724
• Coordinates: 5044735..5046084 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225359.1
• Uniprot ID: -
• Organism: Bacillus cereus strain AFA01
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5039735..5051084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JM957_RS25900	-	5039903..5040598 (-)	696	WP_000466505.1	hypothetical protein	-
JM957_RS25905	-	5040585..5041373 (-)	789	WP_065382318.1	hypothetical protein	-
JM957_RS25910	-	5041401..5041970 (-)	570	WP_001211060.1	hypothetical protein	-
JM957_RS25915	-	5042088..5042570 (-)	483	WP_000023374.1	hypothetical protein	-
JM957_RS25920	raiA	5042842..5043384 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
JM957_RS25925	cspC	5043707..5043904 (-)	198	WP_001990088.1	cold shock protein CspC	-
JM957_RS25930	-	5044031..5044735 (-)	705	WP_033693505.1	ComF family protein	-
JM957_RS25935	comFA	5044735..5046084 (-)	1350	WP_000225359.1	ATP-dependent helicase ComFA	Machinery gene
JM957_RS25940	-	5046211..5047656 (-)	1446	WP_000499476.1	C40 family peptidase	-
JM957_RS25945	-	5047805..5048119 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
JM957_RS25950	-	5048292..5049134 (-)	843	WP_000684725.1	DegV family protein	-
JM957_RS25955	-	5049371..5050006 (+)	636	WP_000926669.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51115.96 Da
• Isoelectric Point: 9.9910

>NTDB_id=530767 JM957_RS25935 WP_000225359.1 5044735..5046084(-) (comFA) [Bacillus cereus strain AFA01]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=530767 JM957_RS25935 WP_000225359.1 5044735..5046084(-) (comFA) [Bacillus cereus strain AFA01]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCATATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49