Detailed information NTG0530715

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: JM956_RS26930
• Genome accession: NZ_CP068719
• Coordinates: 5229494..5230843 (-)
• Length: 449 a.a.
• NCBI ID: WP_074593730.1
• Uniprot ID: -
• Organism: Bacillus cereus strain 21155
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5224494..5235843

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JM956_RS26910	secA	5224821..5227328 (-)	2508	WP_000579370.1	preprotein translocase subunit SecA	-
JM956_RS26915	raiA	5227601..5228143 (-)	543	WP_000671186.1	ribosome-associated translation inhibitor RaiA	-
JM956_RS26920	cspC	5228466..5228663 (-)	198	WP_003303412.1	cold shock protein CspC	-
JM956_RS26925	-	5228790..5229494 (-)	705	WP_033690030.1	ComF family protein	-
JM956_RS26930	comFA	5229494..5230843 (-)	1350	WP_074593730.1	ATP-dependent helicase ComFA	Machinery gene
JM956_RS26935	-	5230971..5232401 (-)	1431	WP_000499495.1	C40 family peptidase	-
JM956_RS26940	-	5232550..5232864 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
JM956_RS26945	-	5233037..5233879 (-)	843	WP_000684725.1	DegV family protein	-
JM956_RS26950	-	5234116..5234751 (+)	636	WP_000926664.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 50938.71 Da
• Isoelectric Point: 9.7741

>NTDB_id=530715 JM956_RS26930 WP_074593730.1 5229494..5230843(-) (comFA) [Bacillus cereus strain 21155]
MLAGKQLLLDELSSDLQRELNDLKKKGEVVCVQGVKKKASKYVCQRCGNIEQRLFASFLCKTCSKVCTYCRKCITMGRVS
ECAVLVRGIGERKREKNLNLLQWNGTLSAGQDFAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVMVVDEIDAFPYCVDQMLQYAVKQAM
KERAARIYLTATPDETWKRKLRKGKQKGVIVSGRYHRHPLPVPLFCWCGNWKKNLIHKRIPRVLLQWLQTYLNKKFPIFL
FVPHVRYIEEISLLLKPLNNRIEGVHAEDPGRKEKIAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSSEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAEEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=530715 JM956_RS26930 WP_074593730.1 5229494..5230843(-) (comFA) [Bacillus cereus strain 21155]
ATGCTAGCGGGGAAACAGTTGCTATTAGACGAACTTTCTTCAGATTTACAGAGGGAATTAAATGATTTGAAAAAGAAGGG
AGAGGTCGTGTGTGTACAAGGTGTAAAAAAGAAGGCTTCTAAATATGTATGTCAGCGCTGTGGAAATATAGAGCAGCGAC
TATTTGCGTCGTTTTTATGTAAAACGTGTAGTAAAGTGTGCACATATTGCCGAAAGTGTATAACGATGGGGAGGGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGGTGAAAGAAAGAGAGAAAAGAATTTAAACTTGTTACAGTGGAACGGGACGTT
GTCTGCTGGACAAGATTTTGCGGCGCAAGGAGTTATAGAGGCCATTAAGCAAAAAGAATCCTTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGAATTAACGAAGCGCTTCAAAAAGGGGAAAGAGTTTGTATCGCAACG
CCGAGAACGGATGTTGTTCTAGAATTAGCACCGAGATTGCAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTGGATAAAGAAAAAGATGCAGTACTAGTGGTTGCGACTACGCATCAGTTATTACGTTATTATAGGGCATTCC
ATGTCATGGTTGTAGATGAAATAGATGCTTTTCCATATTGTGTAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAGAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAACTTAGAAAAGGTAAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCCTTGCCAGTTCCTTTATTTTGTTGGTGCGGGAATTGGAAAAAAA
ACCTCATTCATAAAAGAATTCCTCGAGTTTTACTACAGTGGTTACAAACATACTTAAATAAAAAATTCCCTATTTTTTTA
TTTGTCCCCCATGTGCGATATATAGAAGAAATAAGCTTGTTGTTAAAACCATTAAACAATCGAATTGAAGGTGTACATGC
AGAAGATCCGGGGAGAAAAGAAAAAATAGCGGCTTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGTGTAACGGTGAAAAATTTGCAAGTCGCAGTTTTAGGGGCGGAAGAAGAAATATTCTCAGAAAGTGCACTCGTA
CAAATTGCGGGTCGAGCAGGGCGGAGCTCTGAAGCGCCGTATGGAGAGGTTATTTATTTTCACTATGGTAAGACAGAAGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGGAAGAACAAGGATTGATTGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-409)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.452	98.441	0.497
comFA	Latilactobacillus sakei subsp. sakei 23K	42.289	89.532	0.379