Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | JMY07_RS15595 | Genome accession | NZ_CP068709 |
| Coordinates | 3443967..3445268 (+) | Length | 433 a.a. |
| NCBI ID | WP_009893082.1 | Uniprot ID | Q2T1C5 |
| Organism | Burkholderia thailandensis strain AW34-19p | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3438967..3450268
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMY07_RS15565 (JMY07_15565) | - | 3439538..3440152 (+) | 615 | WP_025369612.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| JMY07_RS15570 (JMY07_15570) | pth | 3440266..3440871 (+) | 606 | WP_009893073.1 | aminoacyl-tRNA hydrolase | - |
| JMY07_RS15575 (JMY07_15575) | hisC | 3440945..3442012 (+) | 1068 | WP_011401783.1 | histidinol-phosphate transaminase | - |
| JMY07_RS15580 (JMY07_15580) | - | 3442146..3442409 (-) | 264 | WP_009893077.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| JMY07_RS15585 (JMY07_15585) | coaD | 3442474..3442974 (-) | 501 | WP_004195249.1 | pantetheine-phosphate adenylyltransferase | - |
| JMY07_RS15590 (JMY07_15590) | rsmD | 3443083..3443709 (-) | 627 | WP_019255510.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| JMY07_RS15595 (JMY07_15595) | pilA | 3443967..3445268 (+) | 1302 | WP_009893082.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| JMY07_RS15600 (JMY07_15600) | maiA | 3445426..3446070 (-) | 645 | WP_009893084.1 | maleylacetoacetate isomerase | - |
| JMY07_RS15605 (JMY07_15605) | nirB | 3446463..3448907 (+) | 2445 | WP_009893095.1 | nitrite reductase large subunit NirB | - |
| JMY07_RS15610 (JMY07_15610) | nirD | 3448983..3449378 (+) | 396 | WP_009893098.1 | nitrite reductase small subunit NirD | - |
Sequence
Protein
Download Length: 433 a.a. Molecular weight: 45283.62 Da Isoelectric Point: 5.3487
>NTDB_id=530587 JMY07_RS15595 WP_009893082.1 3443967..3445268(+) (pilA) [Burkholderia thailandensis strain AW34-19p]
MFSFFKRFKKAPDAAPAEPQQAPDAPQDAAGESAAPEAASKAARVDAPAAPVSRGEYSEAPATERPRSDAPAPVRATPPV
SPAAATPESPAGQPSAAEAARAPSVVMTVTPAANGRNGVVETVEIVPPPAPEPAAKKSWIARLKSGLAKTSSSITNVFVN
TKIDDALYEELETALLMSDAGVDATEHLLGALREKVRTGRLTDPQQVKDALRGLLVELLTPLEQSLVLGRAQPLVMMIAG
VNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAIWGERNNVTVVQQESGDPAAVIFDAVSAARARNIDVMMA
DTAGRLPTQLHLMEELRKVKRVIGKAHDGAPHEVLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIA
RQRPIPVYFIGVGEKVEDLQPFSAEEFADALLG
MFSFFKRFKKAPDAAPAEPQQAPDAPQDAAGESAAPEAASKAARVDAPAAPVSRGEYSEAPATERPRSDAPAPVRATPPV
SPAAATPESPAGQPSAAEAARAPSVVMTVTPAANGRNGVVETVEIVPPPAPEPAAKKSWIARLKSGLAKTSSSITNVFVN
TKIDDALYEELETALLMSDAGVDATEHLLGALREKVRTGRLTDPQQVKDALRGLLVELLTPLEQSLVLGRAQPLVMMIAG
VNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAIWGERNNVTVVQQESGDPAAVIFDAVSAARARNIDVMMA
DTAGRLPTQLHLMEELRKVKRVIGKAHDGAPHEVLLVIDANTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIA
RQRPIPVYFIGVGEKVEDLQPFSAEEFADALLG
Nucleotide
Download Length: 1302 bp
>NTDB_id=530587 JMY07_RS15595 WP_009893082.1 3443967..3445268(+) (pilA) [Burkholderia thailandensis strain AW34-19p]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAGCGCCCGACGCCGCACCGGCCGAGCCGCAGCAAGCGCCCGACGCGCCGCA
GGACGCGGCCGGCGAGTCGGCCGCGCCCGAGGCCGCGTCCAAGGCCGCGCGAGTCGACGCGCCCGCTGCGCCGGTCTCGC
GCGGCGAGTACAGCGAAGCGCCGGCTACCGAACGGCCCCGTTCCGACGCGCCGGCCCCCGTTCGCGCGACACCGCCCGTC
TCCCCCGCAGCAGCGACGCCGGAATCGCCGGCCGGGCAGCCGTCCGCCGCCGAAGCGGCGCGCGCGCCGTCCGTCGTGAT
GACGGTGACGCCGGCCGCCAACGGCCGCAACGGCGTCGTCGAGACGGTCGAGATCGTGCCGCCGCCCGCGCCCGAGCCGG
CCGCGAAGAAATCGTGGATCGCGCGGCTGAAGTCCGGCCTCGCGAAGACGAGCTCGAGCATCACGAACGTGTTCGTGAAC
ACGAAGATCGACGACGCGCTCTACGAGGAGCTCGAGACGGCGCTGCTGATGTCCGACGCCGGCGTCGACGCGACCGAGCA
TCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCACGGGCCGCCTCACCGATCCGCAACAGGTGAAGGACGCGCTGCGCGGCC
TGCTCGTCGAGTTGCTGACGCCGCTCGAGCAGTCGCTCGTGCTCGGCCGCGCGCAGCCGCTCGTGATGATGATCGCGGGC
GTGAACGGCGCGGGCAAGACGACGAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGATCAATCGGTGCTGCTCGC
CGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATCTGGGGCGAGCGCAACAACGTGACCGTCGTCCAGC
AGGAAAGCGGCGATCCGGCCGCGGTGATTTTCGATGCGGTCAGCGCCGCGCGCGCGCGCAACATCGACGTGATGATGGCC
GACACCGCGGGCCGCCTGCCGACGCAGCTGCATCTGATGGAAGAGCTCCGGAAGGTGAAGCGCGTGATCGGCAAGGCGCA
CGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTCGCGCAGGTGAAGGCCTTCG
ACGACGCGCTCGGCCTCACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGCATCCTCGCCGCGATCGCG
CGCCAGCGGCCGATTCCGGTGTACTTCATCGGCGTCGGCGAGAAGGTCGAGGATCTGCAGCCGTTCAGCGCGGAGGAATT
CGCGGACGCGCTGCTCGGATAA
ATGTTCAGCTTCTTCAAACGATTCAAGAAAGCGCCCGACGCCGCACCGGCCGAGCCGCAGCAAGCGCCCGACGCGCCGCA
GGACGCGGCCGGCGAGTCGGCCGCGCCCGAGGCCGCGTCCAAGGCCGCGCGAGTCGACGCGCCCGCTGCGCCGGTCTCGC
GCGGCGAGTACAGCGAAGCGCCGGCTACCGAACGGCCCCGTTCCGACGCGCCGGCCCCCGTTCGCGCGACACCGCCCGTC
TCCCCCGCAGCAGCGACGCCGGAATCGCCGGCCGGGCAGCCGTCCGCCGCCGAAGCGGCGCGCGCGCCGTCCGTCGTGAT
GACGGTGACGCCGGCCGCCAACGGCCGCAACGGCGTCGTCGAGACGGTCGAGATCGTGCCGCCGCCCGCGCCCGAGCCGG
CCGCGAAGAAATCGTGGATCGCGCGGCTGAAGTCCGGCCTCGCGAAGACGAGCTCGAGCATCACGAACGTGTTCGTGAAC
ACGAAGATCGACGACGCGCTCTACGAGGAGCTCGAGACGGCGCTGCTGATGTCCGACGCCGGCGTCGACGCGACCGAGCA
TCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCACGGGCCGCCTCACCGATCCGCAACAGGTGAAGGACGCGCTGCGCGGCC
TGCTCGTCGAGTTGCTGACGCCGCTCGAGCAGTCGCTCGTGCTCGGCCGCGCGCAGCCGCTCGTGATGATGATCGCGGGC
GTGAACGGCGCGGGCAAGACGACGAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGATCAATCGGTGCTGCTCGC
CGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATCTGGGGCGAGCGCAACAACGTGACCGTCGTCCAGC
AGGAAAGCGGCGATCCGGCCGCGGTGATTTTCGATGCGGTCAGCGCCGCGCGCGCGCGCAACATCGACGTGATGATGGCC
GACACCGCGGGCCGCCTGCCGACGCAGCTGCATCTGATGGAAGAGCTCCGGAAGGTGAAGCGCGTGATCGGCAAGGCGCA
CGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTCGCGCAGGTGAAGGCCTTCG
ACGACGCGCTCGGCCTCACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGCATCCTCGCCGCGATCGCG
CGCCAGCGGCCGATTCCGGTGTACTTCATCGGCGTCGGCGAGAAGGTCGAGGATCTGCAGCCGTTCAGCGCGGAGGAATT
CGCGGACGCGCTGCTCGGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
50.227 |
100 |
0.51 |