Detailed information NTG0530143

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K8B73_RS23460
• Genome accession: NZ_CP082827
• Coordinates: 4886748..4887773 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain SCAID WND2-2021 (3/145)
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4881748..4892773

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8B73_RS23440 (K8B73_23440)	metJ	4882933..4883250 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
K8B73_RS23445 (K8B73_23445)	yiiX	4883310..4883918 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
K8B73_RS23450 (K8B73_23450)	rpmE	4883979..4884191 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
K8B73_RS23455 (K8B73_23455)	priA	4884394..4886592 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
K8B73_RS23460 (K8B73_23460)	cytR	4886748..4887773 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K8B73_RS23465 (K8B73_23465)	ftsN	4887865..4888824 (+)	960	WP_000068844.1	cell division protein FtsN	-
K8B73_RS23470 (K8B73_23470)	hslV	4888917..4889447 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K8B73_RS23475 (K8B73_23475)	hslU	4889457..4890788 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K8B73_RS23480 (K8B73_23480)	menA	4890855..4891781 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K8B73_RS23485 (K8B73_23485)	rraA	4891874..4892359 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=530143 K8B73_RS23460 WP_000644904.1 4886748..4887773(+) (cytR) [Escherichia coli strain SCAID WND2-2021 (3/145)]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=530143 K8B73_RS23460 WP_000644904.1 4886748..4887773(+) (cytR) [Escherichia coli strain SCAID WND2-2021 (3/145)]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628