Detailed information NTG0530143

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: JHT21_RS20780
• Genome accession: NZ_CP068639
• Coordinates: 1165498..1166595 (+)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain VP120
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1160498..1171595

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JHT21_RS20750 (JHT21_20715)	-	1160634..1161611 (+)	978	WP_015313433.1	Gfo/Idh/MocA family protein	-
JHT21_RS20755 (JHT21_20720)	-	1161685..1163022 (-)	1338	WP_029803881.1	MATE family efflux transporter	-
JHT21_RS20760 (JHT21_20725)	-	1163145..1163459 (-)	315	WP_005453573.1	DUF496 family protein	-
JHT21_RS20765 (JHT21_20730)	-	1163787..1164002 (+)	216	WP_005477197.1	hypothetical protein	-
JHT21_RS20770 (JHT21_20735)	-	1164179..1164829 (+)	651	WP_017447360.1	YceH family protein	-
JHT21_RS20775 (JHT21_20740)	-	1164826..1165146 (+)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
JHT21_RS20780 (JHT21_20745)	luxP	1165498..1166595 (+)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
JHT21_RS20785 (JHT21_20750)	luxQ	1166595..1169171 (+)	2577	WP_025521028.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
JHT21_RS20790 (JHT21_20755)	-	1169383..1169838 (+)	456	WP_025525184.1	MarR family transcriptional regulator	-
JHT21_RS20795 (JHT21_20760)	-	1169876..1170931 (+)	1056	WP_015313427.1	HlyD family secretion protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=530143 JHT21_RS20780 WP_005463467.1 1165498..1166595(+) (luxP) [Vibrio parahaemolyticus strain VP120]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=530143 JHT21_RS20780 WP_005463467.1 1165498..1166595(+) (luxP) [Vibrio parahaemolyticus strain VP120]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTGCCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCCGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAGATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCTGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACACGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCAGCAAAAGCCAGCTTGAAAAAGTACCCAGATGTCGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTTATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCTATGGCA
GAGGCGATTAAATGGGATTTGGAAGGTAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGACAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644