Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   JL104_RS04830 Genome accession   NZ_CP068576
Coordinates   1025663..1026706 (+) Length   347 a.a.
NCBI ID   WP_002511392.1    Uniprot ID   A0A9X4QYU5
Organism   Staphylococcus equorum strain KS1030     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1020663..1031706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JL104_RS04805 - 1021720..1022439 (+) 720 WP_002507200.1 type 1 glutamine amidotransferase -
  JL104_RS04810 - 1022538..1023524 (-) 987 WP_002507201.1 FUSC family protein -
  JL104_RS04815 map 1023705..1024457 (+) 753 WP_002507202.1 type I methionyl aminopeptidase -
  JL104_RS04820 - 1024562..1024948 (+) 387 WP_202809240.1 hypothetical protein -
  JL104_RS04825 liaF 1024965..1025666 (+) 702 WP_002507204.1 cell wall-active antibiotics response protein LiaF -
  JL104_RS04830 vraS 1025663..1026706 (+) 1044 WP_002511392.1 sensor histidine kinase Regulator
  JL104_RS04835 vraR 1026696..1027325 (+) 630 WP_002507206.1 response regulator transcription factor Regulator
  JL104_RS04840 - 1027521..1028687 (-) 1167 WP_002511391.1 YihY/virulence factor BrkB family protein -
  JL104_RS04845 - 1028918..1029202 (-) 285 WP_002507208.1 hypothetical protein -
  JL104_RS04850 - 1029209..1029673 (-) 465 WP_002507209.1 low molecular weight protein-tyrosine-phosphatase -
  JL104_RS04855 - 1029829..1030011 (+) 183 WP_226956897.1 DUF1128 family protein -
  JL104_RS04860 - 1030027..1031265 (+) 1239 WP_056935763.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39973.32 Da        Isoelectric Point: 5.8180

>NTDB_id=529631 JL104_RS04830 WP_002511392.1 1025663..1026706(+) (vraS) [Staphylococcus equorum strain KS1030]
MNHYIRAIGSMLILVYSTFFALFFIDKVFVNIVYFQGMFYTQIFGIPVLLFLNLLVIFLCIIVGSVLAYKINQQNHWLQD
QIERSIEGQTVGINDQNIELYNETIELYQTLVPLNQEVHKLRMKTQNLTNESYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETQLEAPLDQQIPILEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVVDLKKKVPMKVVHDI
EEFEVPKGIEDHLFRITQEALSNTLRHSKGTKVTVELFNMADYLLLRIQDNGKGFNVDDKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSHDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=529631 JL104_RS04830 WP_002511392.1 1025663..1026706(+) (vraS) [Staphylococcus equorum strain KS1030]
ATGAATCACTACATAAGAGCAATAGGATCCATGTTGATATTAGTTTATAGCACATTTTTTGCTCTGTTTTTTATCGATAA
AGTATTTGTAAACATAGTATATTTTCAAGGTATGTTTTATACACAAATTTTTGGAATACCAGTTTTACTATTTTTAAACT
TATTAGTTATTTTTCTTTGTATTATTGTAGGATCGGTATTAGCATATAAAATAAATCAACAAAATCACTGGTTACAAGAC
CAAATAGAACGTTCTATTGAAGGTCAAACAGTAGGTATTAATGATCAAAACATTGAATTATATAATGAAACAATTGAATT
GTATCAAACGTTAGTTCCATTAAATCAAGAAGTTCACAAATTACGTATGAAAACGCAAAACTTAACAAATGAATCATATA
ATATAAATGATGTGAAAGTTAAAAAGATTATAGAAGATGAACGACAAAGGCTTGCACGTGAATTACACGATTCAGTAAGT
CAGCAATTATTTGCAGCGAGTATGATGCTTTCAGCTATTAAAGAAACACAGTTAGAAGCACCTTTAGATCAACAAATTCC
GATATTAGAAAAAATGGTACAAGATTCTCAGTTAGAGATGAGAGCTTTACTATTACATTTAAGACCTATTGGATTAAAAG
ACAAATCATTAGGTGAAGGTATTAAAGATTTAGTCGTTGATTTAAAGAAAAAAGTACCTATGAAAGTTGTACATGATATT
GAAGAATTTGAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACGCAAGAAGCTTTATCTAATACTTTGAGACA
TTCAAAAGGTACCAAAGTAACAGTAGAATTGTTTAATATGGCAGATTACTTATTATTACGCATTCAAGATAATGGTAAAG
GGTTCAATGTTGATGATAAGGTAGAACAAAGTTATGGTTTAAAAAACATGAGAGAACGTGCGCTTGAAATTGGTGCAACG
TTTCATATTGTTTCTTTACCAGATTCAGGTACAAGAATTGAAGTAAAGGCACCATTAAATAAGGAGGATTCACATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

88.184

100

0.882