Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   JL477_RS07135 Genome accession   NZ_CP068567
Coordinates   1369373..1370557 (-) Length   394 a.a.
NCBI ID   WP_087692144.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CC19PF065     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1364373..1375557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JL477_RS07110 (JL477_07110) fliL 1365522..1366058 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  JL477_RS07115 (JL477_07115) acpS 1366058..1366405 (+) 348 WP_002825806.1 holo-ACP synthase -
  JL477_RS07120 (JL477_07120) - 1366406..1366825 (-) 420 WP_002880391.1 hypothetical protein -
  JL477_RS07125 (JL477_07125) - 1366822..1368183 (-) 1362 WP_014517093.1 cytochrome P450 -
  JL477_RS07130 (JL477_07130) - 1368180..1369301 (-) 1122 WP_014517094.1 membrane protein -
  JL477_RS07135 (JL477_07135) kpsS 1369373..1370557 (-) 1185 WP_087692144.1 capsule polysaccharide modification protein KpsS Regulator
  JL477_RS07140 (JL477_07140) kpsC 1370554..1372461 (-) 1908 Protein_1390 capsular polysaccharide biosynthesis protein -
  JL477_RS07145 (JL477_07145) - 1372499..1373221 (-) 723 WP_032590580.1 inositol monophosphatase family protein -
  JL477_RS07150 (JL477_07150) - 1373221..1373712 (-) 492 WP_032590583.1 YhcH/YjgK/YiaL family protein -
  JL477_RS07155 (JL477_07155) - 1373712..1374644 (-) 933 WP_167842922.1 phosphoglycerate dehydrogenase -
  JL477_RS07160 (JL477_07160) - 1374634..1375344 (-) 711 WP_052786801.1 cytidylyltransferase domain-containing protein -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46852.45 Da        Isoelectric Point: 9.8297

>NTDB_id=529591 JL477_RS07135 WP_087692144.1 1369373..1370557(-) (kpsS) [Campylobacter jejuni strain CC19PF065]
MRFSTKIKKEFSGENVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=529591 JL477_RS07135 WP_087692144.1 1369373..1370557(-) (kpsS) [Campylobacter jejuni strain CC19PF065]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTGAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGACCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAATCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAACGATTTAAGTCAAAAATATCATGTAG
AGGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTAGTATGTAATTTTAAGA
AATATCTTTTACAAACTAACCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.985

100

0.99